RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SLC25A45Q8N413 288 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 RAB42Q8N4Z0 105 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 BHLHE23Q8NDY6 225 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 OR51A4Q8NGJ6 313 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 ARSGQ96EG1 525 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 MBNL1Q9NR56 388 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 IGSF10Q6WRI0 2623 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 RP1P56715 2156 aa9.37□□□□□ -0.91
NIF3L1-204ENST00000409357 A0A087WV48 116 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 CENPVL1A0A0U1RR11 272 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 A0A1B0GU03 582 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 DKK1O94907 266 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 HBE1P02100 147 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 QDPRP09417 244 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 PGA4P0DJD7 388 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 PGA5P0DJD9 388 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 GIMD1P0DJR0 217 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 TMEM225BP0DP42 221 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 OR10J1P30954 320 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 APLNRP35414 380 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 GNALP38405 381 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 CDKN2AP42771 156 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 FZD2Q14332 565 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 ARSJQ5FYB0 599 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 ZNF343Q6P1L6 599 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 CENPVQ7Z7K6 275 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 SGPP2Q8IWX5 399 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 ARHGEF39Q8N4T4 335 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 OR4X1Q8NH49 305 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 OTOSQ8NHW6 89 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 INTS14Q96SY0 518 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 MSL2Q9HCI7 577 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 IKZF2Q9UKS7 526 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 FEZF1A0PJY2 475 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 FITM1A5D6W6 292 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 CA11O75493 328 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 IFNA21P01568 189 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 PRH1P02810 166 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 CSN2P05814 226 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 IL6RP08887 468 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 SLC35G6P0C7Q6 338 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 FGF5P12034 268 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 MYF5P13349 255 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 PBLDP30039 288 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 RND3P61587 244 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 DPTQ07507 201 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 SGCGQ13326 291 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 TAF9Q16594 264 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 ACSF3Q4G176 576 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 NKAIN1Q4KMZ8 207 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 PDZD11Q5EBL8 140 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 GALNTL5Q7Z4T8 443 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 NAXEQ8NCW5 288 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 TMEM104Q8NE00 496 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 SLC26A10Q8NG04 563 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 OIT3Q8WWZ8 545 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 IL17FQ96PD4 163 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 CMKLR1Q99788 373 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 URM1Q9BTM9 101 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 DECR2Q9NUI1 292 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 P4HTMQ9NXG6 502 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 COLEC10Q9Y6Z7 277 aa9.36□□□□□ -0.91
NIF3L1-204ENST00000409357 MGAQ8IWI9 3026 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 FAM208BQ5VWN6 2430 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 COL27A1Q8IZC6 1860 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 SPTY2D1-AS1A0A0U1RR47 76 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 A6NIZ1 184 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 GLOD5A6NK44 160 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 ERI3O43414 337 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 TNFSF14O43557 240 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 PIAS2O75928 621 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 MBPP02686 304 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 CD82P27701 267 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 BRS3P32247 399 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 CSNK1A1P48729 337 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 S100A10P60903 97 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 RPP30P78346 268 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 PSG6Q00889 435 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 MFGE8Q08431 387 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 PMS2P11Q13670 270 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 TCEA2Q15560 299 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 IAH1Q2TAA2 248 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 ACOT6Q3I5F7 207 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 DHRS13Q6UX07 377 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 FNDC9Q8TBE3 224 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 MRGPRDQ8TDS7 321 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 NPRL2Q8WTW4 380 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 TMEM170AQ8WVE7 144 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 KCNE4Q8WWG9 221 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 RAB11FIP5Q9BXF6 653 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 KCNK15Q9H427 330 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 LPAR2Q9HBW0 351 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 HHLA2Q9UM44 414 aa9.35□□□□□ -0.91
NIF3L1-204ENST00000409357 B3GALT5Q9Y2C3 310 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms