RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 OCIAD1Q9NX40 245 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 GNG13Q9P2W3 67 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 IL36RNQ9UBH0 155 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 MIOXQ9UGB7 285 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 OR14J1Q9UGF5 321 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 RNF150Q9ULK6 438 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 ZNF816-ZNF321PA0A0X1KG74 233 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 C7orf77A4D0Y5 90 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 FAM166BA8MTA8 275 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 PRSS44E7EML9 344 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 TERTO14746 1132 aaKnown RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 SCAF4O95104 1147 aaKnown RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 MT-ATP6P00846 226 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 CLPSP04118 112 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 FABP1P07148 127 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 TAGLN2P37802 199 aaKnown RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 MRPS21P82921 87 aaKnown RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 GNMTQ14749 295 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 EMC4Q5J8M3 183 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 CXorf67Q86X51 503 aaPredicted RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 INTS12Q96CB8 462 aaKnown RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 WBP1Q96G27 269 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 C2orf50Q96LR7 162 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 LIPGQ9Y5X9 500 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 ACACAQ13085 2346 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 IGHV1OR15-9A0A0B4J2B8 117 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 ZNF724A8MTY0 619 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 PATE3B3GLJ2 98 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 UBE2KP61086 200 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 RAB11AP62491 216 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 CTAG1AP78358 180 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 TSC22D1Q15714 1073 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 SOHLH1Q5JUK2 328 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 PHYHD1Q5SRE7 291 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 OR8G2PQ6IF36 304 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 EIF5AL1Q6IS14 154 aaKnown RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 RPUSD3Q6P087 351 aaKnown RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 NKAIN3Q8N8D7 197 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 SP7Q8TDD2 431 aaPredicted RBP7.31□□□□□ -1.24
SNX13-201ENST00000409076 HPSE2Q8WWQ2 592 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 PECRQ9BY49 303 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 ADAM19Q9H013 955 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 FAM206AQ9NX38 181 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 PLA2G3Q9NZ20 509 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 LPAR3Q9UBY5 353 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 ST3GAL6Q9Y274 331 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 HS3ST3A1Q9Y663 406 aa7.31□□□□□ -1.24
SNX13-201ENST00000409076 USF3Q68DE3 2245 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 BORCS7-ASMTA0A0B4J1R7 106 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 H0YL77 283 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 CD37P11049 281 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 MSX1P28360 303 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 S100A2P29034 98 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 CYCSP99999 105 aaKnown RBP7.3□□□□□ -1.24
SNX13-201ENST00000409076 WIPI1Q5MNZ9 446 aaPredicted RBP7.3□□□□□ -1.24
SNX13-201ENST00000409076 SLC23A3Q6PIS1 610 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 LINC00696Q6ZRV3 163 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 HAS2Q92819 552 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 TCEAL3Q969E4 200 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 PRRX2Q99811 253 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 C1orf123Q9NWV4 160 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 AK3Q9UIJ7 227 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 IGKV1-9A0A0C4DH69 117 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 EIF4E2O60573 245 aaKnown RBP7.3□□□□□ -1.24
SNX13-201ENST00000409076 TSPAN2O60636 221 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 NDUFS6O75380 124 aaKnown RBP7.3□□□□□ -1.24
SNX13-201ENST00000409076 OR2C1O95371 312 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 CCL3P10147 92 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 CCL4P13236 92 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 FOSL2P15408 326 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 TAS2R31P59538 309 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 CCL7P80098 99 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 NOXO1Q8NFA2 376 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 PHOSPHO2Q8TCD6 241 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 CA5BP1Q8WTZ4 195 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 LIPT2A6NK58 231 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 BCAT2O15382 392 aaPredicted RBP7.3□□□□□ -1.24
SNX13-201ENST00000409076 PET100P0DJ07 73 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 DEFA4P12838 97 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 SLC16A14Q7RTX9 510 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 DTX1Q86Y01 620 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 OPA3Q9H6K4 179 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 SMCO4Q9NRQ5 59 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 SLC2A8Q9NY64 477 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 PPP1R3CQ9UQK1 317 aa7.3□□□□□ -1.24
SNX13-201ENST00000409076 CYB5BO43169 146 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 NDUFA2O43678 99 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 DXOO77932 396 aaKnown RBP7.29□□□□□ -1.24
SNX13-201ENST00000409076 BPNT1O95861 308 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 TFF1P04155 84 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 FASLGP48023 281 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 NSUN5P2Q63ZY6 315 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 ZNF808Q8N4W9 903 aaPredicted RBP7.29□□□□□ -1.24
SNX13-201ENST00000409076 RNF133Q8WVZ7 376 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 AQP3Q92482 292 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 THOC3Q96J01 351 aaKnown RBP7.29□□□□□ -1.24
SNX13-201ENST00000409076 GPX7Q96SL4 187 aaPredicted RBP7.29□□□□□ -1.24
SNX13-201ENST00000409076 FAM117AQ9C073 453 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 NDRG3Q9UGV2 375 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 WNK2Q9Y3S1 2297 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms