RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF20P17024 532 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 AMY2BP19961 511 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 MDKP21741 143 aaPredicted RBP7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 PRKACBP22694 351 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 PRDX2P32119 198 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 IER3P46695 156 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 RBP2P50120 134 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 ATP1B3P54709 279 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 SNRPGP62308 76 aaKnown RBP7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 RPL31P62899 125 aaKnown RBP7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 OCLNQ16625 522 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 OLFML2AQ68BL7 652 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 DUX4L9Q6RFH8 374 aaPredicted RBP7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 CALHM1Q8IU99 346 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 MKXQ8IYA7 352 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 ZSCAN4Q8NAM6 433 aaPredicted RBP7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 ZNRF1Q8ND25 227 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 DNAAF1Q8NEP3 725 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 RORBQ92753 470 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 CPNE2Q96FN4 548 aaPredicted RBP7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 CEP19Q96LK0 163 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 RAB18Q9NP72 206 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 TNFRSF19Q9NS68 423 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 DUX4Q9UBX2 424 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 GLS2Q9UI32 602 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 MAB21L2Q9Y586 359 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 PCDHGB5Q9Y5G0 923 aa7.46□□□□□ -1.22
SNORD88A-201ENST00000408314 MEIOCA2RUB1 952 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 RNASEK-C17orf49H0YIS7 233 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 TIMM23O14925 209 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 SLC16A6O15403 523 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 ANGPTL7O43827 346 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 FCN3O75636 299 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 FADS2O95864 444 aaKnown RBP7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 IGHV4-59P01825 116 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 RBP4P02753 201 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 CHRM2P08172 466 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 HTR1AP08908 422 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 TGFBR2P37173 567 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 CCR9P51686 369 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 LGALS4P56470 323 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 ERVFRD-1P60508 538 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 ISL1P61371 349 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 KPNB1Q14974 876 aaKnown RBP7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 AANATQ16613 207 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 C11orf88Q6PI97 169 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 LHFPL2Q6ZUX7 228 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 GDPD3Q7L5L3 318 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 SSX6Q7RTT6 188 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 PDZD9Q8IXQ8 264 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 FGFRL1Q8N441 504 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 PIP4P2Q8N4L2 257 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 ACBD7Q8N6N7 88 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 ASCC1Q8N9N2 400 aaKnown RBP7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 TRMT10AQ8TBZ6 339 aaKnown RBP7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 WFDC12Q8WWY7 111 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 SPSB1Q96BD6 273 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 RNFT2Q96EX2 444 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 HES4Q9HCC6 221 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 INPP5EQ9NRR6 644 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 C1RLQ9NZP8 487 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 OR14J1Q9UGF5 321 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 HHLA2Q9UM44 414 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 GMPPBQ9Y5P6 360 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 SOX21Q9Y651 276 aaPredicted RBP7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 MGAM2Q2M2H8 2515 aa7.45□□□□□ -1.22
SNORD88A-201ENST00000408314 FUOMA2VDF0 154 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 H3BUI4 141 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 M0QZ24 198 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 MAGEB4O15481 346 aaPredicted RBP7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 SYNGR1O43759 233 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 ENTPD6O75354 484 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 APOL3O95236 402 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 TK1P04183 234 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 ISG15P05161 165 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 CCDC159P0C7I6 412 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 SAA4P35542 130 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 POLR2IP36954 125 aaKnown RBP7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 ERVK11-1P61568 191 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 ELF3P78545 371 aaPredicted RBP7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 ODF4Q2M2E3 257 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 TP53I3Q53FA7 332 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 SPIN3Q5JUX0 258 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 FDX2Q6P4F2 183 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 BRICD5Q6PL45 260 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 LIAT1Q6ZQX7 453 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 UTS2BQ765I0 119 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 SYS1Q8N2H4 156 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 CBR4Q8N4T8 237 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 Q8N7P7 452 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 BEND2Q8NDZ0 799 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 OR13D1Q8NGV5 346 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 OR2G2Q8NGZ5 317 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 TNFRSF14Q92956 283 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 STMN2Q93045 179 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 PPP1R14AQ96A00 147 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 FOXRED1Q96CU9 486 aaPredicted RBP7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 RDH12Q96NR8 316 aa7.44□□□□□ -1.22
SNORD88A-201ENST00000408314 SEBOXQ9HB31 216 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms