RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OR2B11Q5JQS5 317 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 C10orf128Q5T292 105 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 GLCCI1Q86VQ1 547 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 SGK3Q96BR1 496 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 POFUT1Q9H488 388 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 KIF25Q9UIL4 384 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 ZGRF1Q86YA3 2104 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 TMEM200CA6NKL6 621 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 NGFP01138 241 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 UBE2MP61081 183 aaKnown RBP7.93□□□□□ -1.14
LIG4-202ENST00000405925 ZNF362Q5T0B9 420 aaPredicted RBP7.93□□□□□ -1.14
LIG4-202ENST00000405925 Q6ZNX1 250 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 GLYATL2Q8WU03 294 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 TCTEX1D2Q8WW35 142 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 ARL11Q969Q4 196 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 C10orf35Q96D05 121 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 WDYHV1Q96HA8 205 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 PGLYRP3Q96LB9 341 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 PTPRSQ13332 1948 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 A0A0U1RQV5 110 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 CCSO14618 274 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 MSTNO14793 375 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 PPIHO43447 177 aaKnown RBP7.92□□□□□ -1.14
LIG4-202ENST00000405925 LMX1BO60663 402 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 HEXAP06865 529 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 UCP2P55851 309 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 TLE1Q04724 770 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 PNLIPRP3Q17RR3 467 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 IAH1Q2TAA2 248 aaPredicted RBP7.92□□□□□ -1.14
LIG4-202ENST00000405925 BEX5Q5H9J7 111 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 C6orf183Q5T699 404 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 LYPD8Q6UX82 237 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 Q6ZT83 130 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 NOXA1Q86UR1 476 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 MOGAT3Q86VF5 341 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 MFSD4AQ8N468 514 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 USB1Q9BQ65 265 aaKnown RBP7.92□□□□□ -1.14
LIG4-202ENST00000405925 SFXN3Q9BWM7 321 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 SMIM3Q9BZL3 60 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 WNT5BQ9H1J7 359 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 SAP30LQ9HAJ7 183 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 ITGB1BP2Q9UKP3 347 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 RNF150Q9ULK6 438 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 HEATR5AQ86XA9 2040 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 TBPP20226 339 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 ECI1P42126 302 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 LUMP51884 338 aaPredicted RBP7.92□□□□□ -1.14
LIG4-202ENST00000405925 SCAND1P57086 179 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 LY6DQ14210 128 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 SNAI3Q3KNW1 292 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 PIP4P1Q86T03 277 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 ST8SIA4Q92187 359 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 PIK3IP1Q96FE7 263 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 CMTM3Q96MX0 182 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 EDARQ9UNE0 448 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 MRPS18CQ9Y3D5 142 aaKnown RBP7.92□□□□□ -1.14
LIG4-202ENST00000405925 TMEM30CPA0ZSE6 113 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 ATP6V1G2-DDX39BF2Z307 99 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 J3QT63 122 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 SOCS1O15524 211 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 PTGDSP41222 190 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 LIMK1P53667 647 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 ACSF3Q4G176 576 aaPredicted RBP7.92□□□□□ -1.14
LIG4-202ENST00000405925 STX12Q86Y82 276 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 LGI3Q8N145 548 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 C9orf106Q8NAJ2 232 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 OR2AK2Q8NG84 335 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 ST7LQ8TDW4 575 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 FBXW5Q969U6 566 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 PLEKHF2Q9H8W4 249 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 MTFP1Q9UDX5 166 aa7.92□□□□□ -1.14
LIG4-202ENST00000405925 LRRK1Q38SD2 2015 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 NDUFB3O43676 98 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 ONECUT2O95948 504 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 OR8U9P0C7N5 309 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 VSIG8P0DPA2 414 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 RAB6AP20340 208 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 IL3RAP26951 378 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 CALCRP30988 508 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 HES1Q14469 280 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 LINC00303Q3SY05 128 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 MRGPRGQ86SM5 289 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 ZNF546Q86UE3 836 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 TMEM200AQ86VY9 491 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 OR5A2Q8NGI9 324 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 OR8U1Q8NH10 309 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 TMEM54Q969K7 222 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 GPR137Q96N19 417 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 GP6Q9HCN6 339 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 GEMIN2O14893 280 aaKnown RBP7.91□□□□□ -1.14
LIG4-202ENST00000405925 FABP7O15540 132 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 TNFSF12O43508 249 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 SPDEFO95238 335 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 CBR1P16152 277 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 F2RL1P55085 397 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 SRPXP78539 464 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 CCL8P80075 99 aa7.91□□□□□ -1.14
LIG4-202ENST00000405925 SNTB1Q13884 538 aaKnown RBP7.91□□□□□ -1.14
LIG4-202ENST00000405925 GK2Q14410 553 aaPredicted RBP7.91□□□□□ -1.14
LIG4-202ENST00000405925 PRAMEF6Q5VXH4 476 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms