RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 SNAI3Q3KNW1 292 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 ANKRD39Q53RE8 183 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 EIF5AL1Q6IS14 154 aaKnown RBP6.74□□□□□ -1.33
HDAC9-201ENST00000401921 PLXDC2Q6UX71 529 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 HOGA1Q86XE5 327 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 MCEMP1Q8IX19 187 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 BHLHE23Q8NDY6 225 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 STOML3Q8TAV4 291 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 RNF141Q8WVD5 230 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 PP6455Q8WZ26 134 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 MEGF10Q96KG7 1140 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 CALHM2Q9HA72 323 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 ZNF107Q9UII5 783 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-201ENST00000401921 CELSR3Q9NYQ7 3312 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 FRYLO94915 3013 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 PRRC2CQ9Y520 2896 aaKnown RBP6.74□□□□□ -1.33
HDAC9-201ENST00000401921 IGHV1-45A0A0A0MS14 117 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 RNF222A6NCQ9 220 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 C10orf142B7Z368 130 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 HPP00738 406 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 NRASP01111 189 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 HPNP05981 417 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 CD79AP11912 226 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 G0S2P27469 103 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 SPCS3P61009 180 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 LSM6P62312 80 aaKnown RBP6.74□□□□□ -1.33
HDAC9-201ENST00000401921 RAC1P63000 192 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 ZNF616Q08AN1 781 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 CNN3Q15417 329 aaKnown RBP6.74□□□□□ -1.33
HDAC9-201ENST00000401921 PNLIPRP3Q17RR3 467 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 DCAF12Q5T6F0 453 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 TSPO2Q5TGU0 170 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 LINC00696Q6ZRV3 163 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 OR5AP2Q8NGF4 316 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 OR5L1Q8NGL2 311 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 OR2Y1Q8NGV0 311 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 OR13G1Q8NGZ3 307 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 ASB13Q8WXK3 278 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.74□□□□□ -1.33
HDAC9-201ENST00000401921 C1orf123Q9NWV4 160 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 OR5AC2Q9NZP5 309 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 SEMA5BQ9P283 1151 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 GPR132Q9UNW8 380 aa6.74□□□□□ -1.33
HDAC9-201ENST00000401921 RBM7Q9Y580 266 aaKnown RBP6.74□□□□□ -1.33
HDAC9-201ENST00000401921 SHANK1Q9Y566 2161 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 FREM1Q5H8C1 2179 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 A0A087WZY1 265 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 K7EPK0 472 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 ADAM10O14672 748 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 MRPL33O75394 65 aaKnown RBP6.73□□□□□ -1.33
HDAC9-201ENST00000401921 MED6O75586 246 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 DIRAS3O95661 229 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 IFNA2P01563 188 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 MELTFP08582 738 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 H2AFB1P0C5Y9 115 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 CCL2P13500 99 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 FPR2P25090 351 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 CYB561P49447 251 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 CEBPGP53567 150 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 BPIFB3P59826 476 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 RAB2AP61019 212 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 PPIAP62937 165 aaKnown RBP6.73□□□□□ -1.33
HDAC9-201ENST00000401921 EIF5AP63241 154 aaKnown RBP6.73□□□□□ -1.33
HDAC9-201ENST00000401921 PDZK1IP1Q13113 114 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 PMS2CLQ68D20 193 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 LDLRAD3Q86YD5 345 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 FBXL14Q8N1E6 418 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 FAM71E2Q8N5Q1 922 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 TCTEX1D2Q8WW35 142 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 EMG1Q92979 244 aaKnown RBP6.73□□□□□ -1.33
HDAC9-201ENST00000401921 FBXO17Q96EF6 278 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 CNTNAP3BQ96NU0 1288 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 ADAT1Q9BUB4 502 aaKnown RBP6.73□□□□□ -1.33
HDAC9-201ENST00000401921 FAM117AQ9C073 453 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 FAM166BA8MTA8 275 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 SLC31A2O15432 143 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 CER1O95813 267 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 CD8AP01732 235 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 CLDN15P56746 228 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 PIGPP57054 158 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 ESPL1Q14674 2120 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 ANKRD55Q3KP44 614 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 MRPL14Q6P1L8 145 aaKnown RBP6.73□□□□□ -1.33
HDAC9-201ENST00000401921 SLC22A25Q6T423 547 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 DRAM2Q6UX65 266 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 PUSL1Q8N0Z8 303 aaKnown RBP6.73□□□□□ -1.33
HDAC9-201ENST00000401921 S100PBPQ96BU1 408 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 ZNF845Q96IR2 970 aaPredicted RBP6.73□□□□□ -1.33
HDAC9-201ENST00000401921 OR10C1Q96KK4 312 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 RHOVQ96L33 236 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 C2orf50Q96LR7 162 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 HIST1H2AAQ96QV6 131 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 FOXB1Q99853 325 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 EDEM2Q9BV94 578 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 SRXN1Q9BYN0 137 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 PIGMQ9H3S5 423 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 ZFP57Q9NU63 452 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 SLC2A8Q9NY64 477 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 ST3GAL6Q9Y274 331 aa6.73□□□□□ -1.33
HDAC9-201ENST00000401921 ICE1Q9Y2F5 2266 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms