RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 OR10A3P58181 314 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 DSCR9P59020 149 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 GDPGP1Q6ZNW5 385 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 ANKRD13BQ86YJ7 626 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 C1orf87Q8N0U7 546 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 DEFB108BQ8NET1 73 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 OR10Z1Q8NGY1 313 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 KCTD7Q96MP8 289 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 NRIP2Q9BQI9 281 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 NEK6Q9HC98 313 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 CR1P17927 2039 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 TEP1Q99973 2627 aaKnown RBP13.36□□□□□ -0.27
HMGA1-204ENST00000401473 PPIAL4EA0A075B759 164 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 PPIAL4DF5H284 164 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 IGHV2-70P01814 119 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 SFTPBP07988 381 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 CSF3P09919 207 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 PPIAL4FP0DN26 164 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 CALCBP10092 127 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 CD80P33681 288 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 SDC2P34741 201 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 BTG1P62324 171 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 CTF1Q16619 201 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 TIMM50Q3ZCQ8 353 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 SPNS3Q6ZMD2 512 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
HMGA1-204ENST00000401473 CDH26Q8IXH8 852 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 POC1AQ8NBT0 407 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 OR5T2Q8NGG2 359 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 SLITRK2Q9H156 845 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 POLDIP2Q9Y2S7 368 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 PPIAL4AQ9Y536 164 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 MTORP42345 2549 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 IGHV3OR15-7A0A075B7D8 119 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 A0A096LNT2 108 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 SMIM30A4D0T7 59 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 BCL3P20749 454 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 GLRA1P23415 457 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 VBP1P61758 197 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 ASCL4Q6XD76 172 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 FAM90A1Q86YD7 464 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 MKXQ8IYA7 352 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 CIARTQ8N365 385 aaPredicted RBP13.35□□□□□ -0.27
HMGA1-204ENST00000401473 NKAIN3Q8N8D7 197 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 TNFAIP8L1Q8WVP5 186 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 PIMREGQ9BSJ6 248 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 NARFLQ9H6Q4 476 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 HES4Q9HCC6 221 aa13.35□□□□□ -0.27
HMGA1-204ENST00000401473 RBFOX1Q9NWB1 397 aaKnown RBP13.35□□□□□ -0.27
HMGA1-204ENST00000401473 IGHV4-61A0A0C4DH41 118 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 TNFRSF13BO14836 293 aaPredicted RBP13.34□□□□□ -0.27
HMGA1-204ENST00000401473 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 AMY2BP19961 511 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 CAV3P56539 151 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 NCS1P62166 190 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 C1orf100Q5SVJ3 147 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 TEX36Q5VZQ5 186 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 FAM166AQ6J272 317 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 PEG10Q86TG7 708 aaKnown RBP13.34□□□□□ -0.27
HMGA1-204ENST00000401473 ZSCAN4Q8NAM6 433 aaPredicted RBP13.34□□□□□ -0.27
HMGA1-204ENST00000401473 RAB1CQ92928 201 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 CEP19Q96LK0 163 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 C1orf147Q96MC9 270 aaPredicted RBP13.34□□□□□ -0.27
HMGA1-204ENST00000401473 TMEM246Q9BRR3 403 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 UQCC2Q9BRT2 126 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 FAM192AQ9GZU8 254 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 IL36RNQ9UBH0 155 aa13.34□□□□□ -0.27
HMGA1-204ENST00000401473 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.34□□□□□ -0.278e-8■■■□□ 18
HMGA1-204ENST00000401473 OOEPA6NGQ2 149 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 FSTL3O95633 263 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 TFF1P04155 84 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 RAB3BP20337 219 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 MYL9P24844 172 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 MTNR1BP49286 362 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 MXD1Q05195 221 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 GLT8D1Q68CQ7 371 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 ACP7Q6ZNF0 438 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 SAXO1Q8IYX7 474 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 PXT1Q8NFP0 134 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 OR10K1Q8NGX5 313 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 SLC25A28Q96A46 364 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 TIMD4Q96H15 378 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 SMURF1Q9HCE7 757 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 V9GY05 133 aa13.33□□□□□ -0.27
HMGA1-204ENST00000401473 A0A0G2JK05 382 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 A0A1W2PP11 408 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 ISPDA4D126 451 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 RNF223E7ERA6 249 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 TRAPPC2LH3BP13 241 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 LGALS8O00214 317 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 KDM4BO94953 1096 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 GABARAPO95166 117 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 ZNF404Q494X3 552 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 LYPD2Q6UXB3 125 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 CLVS1Q8IUQ0 354 aaPredicted RBP13.33□□□□□ -0.28
HMGA1-204ENST00000401473 PNLDC1Q8NA58 520 aaKnown RBP13.33□□□□□ -0.28
HMGA1-204ENST00000401473 MAPK1IP1LQ8NDC0 245 aa13.33□□□□□ -0.28
HMGA1-204ENST00000401473 FOXRED1Q96CU9 486 aaPredicted RBP13.33□□□□□ -0.28
HMGA1-204ENST00000401473 CPNE2Q96FN4 548 aaPredicted RBP13.33□□□□□ -0.28
HMGA1-204ENST00000401473 ING4Q9UNL4 249 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms