RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 PRDM6Q9NQX0 595 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 ANXA10Q9UJ72 324 aa12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 C14orf166Q9Y224 244 aaKnown RBP12.63□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF850A8MQ14 1090 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF587BE7ETH6 402 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 SYNGR3O43761 229 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 DIRAS3O95661 229 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 RBMXP38159 391 aaKnown RBP12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 RFC3P40938 356 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 CLDN15P56746 228 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 B3GALT5-AS1P59052 145 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 Q0VFX4 171 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 FOXL2NBQ6ZUU3 175 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 CCDC36Q8IYA8 594 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 TAF9BQ9HBM6 251 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 SH2D2AQ9NP31 389 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 UQCC1Q9NVA1 299 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 NSG1A0A0A6YYJ2 146 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 XRCC2O43543 280 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 EIF1BO60739 113 aaKnown RBP12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 MED6O75586 246 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 RGS19P49795 217 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 PIGPP57054 158 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 NAAAQ02083 359 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 C9orf135Q5VTT2 229 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 FBXL14Q8N1E6 418 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 AGBL5Q8NDL9 886 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 ADAMTS17Q8TE56 1095 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 RHBDD1Q8TEB9 315 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 SPTSSAQ969W0 71 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF845Q96IR2 970 aaPredicted RBP12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 CNTNAP3BQ96NU0 1288 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 CNTNAP3Q9BZ76 1288 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF700Q9H0M5 742 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 RHOFQ9HBH0 211 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 PADI1Q9ULC6 663 aa12.62□□□□□ -0.39
CCDC144A-205ENST00000399264 TRAPPC6AO75865 159 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 RAC1P63000 192 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 PSG4Q00888 419 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 AKIRIN2Q53H80 203 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 WIPI1Q5MNZ9 446 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 LYZL2Q7Z4W2 148 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 OR10AD1Q8NGE0 317 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 OR14L1PQ8NHC6 308 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 SCGB3A2Q96PL1 93 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 WDR54Q9H977 334 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 PCP4L1A6NKN8 68 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 OR5AC1P0C628 307 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 RPL12P30050 165 aaKnown RBP12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 FCGR2CP31995 323 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 AKR1C3P42330 323 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 FHITP49789 147 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 ASCL1P50553 236 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF84P51523 738 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 TMEM33P57088 247 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF92Q03936 586 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 PMS2CLQ68D20 193 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 HAGHLQ6PII5 290 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 UQCC3Q6UW78 93 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 SVBPQ8N300 66 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 ABHD3Q8WU67 409 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 CMSS1Q9BQ75 279 aaKnown RBP12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 GHRLQ9UBU3 117 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 LAMA5O15230 3695 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 A0A087WZY1 265 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 OTX2P32243 289 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 HTR5AP47898 357 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 ZNF133P52736 654 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 MLF1P58340 268 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 MRPS34P82930 218 aaKnown RBP12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 STK11Q15831 433 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 GGNQ86UU5 652 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 OR5L1Q8NGL2 311 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 OR1F12Q8NHA8 337 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 NAA11Q9BSU3 229 aaPredicted RBP12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 DEPPQ9NTK1 212 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 P4HTMQ9NXG6 502 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 AMDHD2Q9Y303 409 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 RFNGQ9Y644 331 aa12.61□□□□□ -0.39
CCDC144A-205ENST00000399264 MED13Q9UHV7 2174 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 PINLYPA6NC86 204 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 VAMP5O95183 116 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 CCL2P13500 99 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 CARD18P57730 90 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 IL11RAQ14626 422 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 LPAL2Q16609 132 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 CALHM1Q8IU99 346 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 SGPP2Q8IWX5 399 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 OR2Y1Q8NGV0 311 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 FNDC9Q8TBE3 224 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 HS3ST6Q96QI5 342 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 MMP26Q9NRE1 261 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 CRIM1Q9NZV1 1036 aa12.6□□□□□ -0.39
CCDC144A-205ENST00000399264 CRYM-AS1A6NIL9 109 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms