RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TIPARPQ7Z3E1 657 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 C1orf210Q8IVY1 113 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 AKR7LQ8NHP1 331 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 RTBDNQ9BSG5 229 aaPredicted RBP16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CHMP1AQ9HD42 196 aaPredicted RBP16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 EHFQ9NZC4 300 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DOCK10Q96BY6 2186 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 UBE2CO00762 179 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CRHP06850 196 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ALDH3B1P43353 468 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 NKAPLQ5M9Q1 402 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 UNQ6126/PRO20091Q6UXV3 157 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DEPPQ9NTK1 212 aa16■□□□□ 0.15
CHRFAM7A-202ENST00000397827 NCOR1O75376 2440 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 IGKV1D-8A0A087WSZ0 117 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TMEM225BP0DP42 221 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GLRA1P23415 457 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 NPBWR1P48145 328 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 MTCP1P56278 107 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SUPT4H1P63272 117 aaKnown RBP15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 BLOC1S1P78537 153 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 RNF212Q495C1 297 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DCAF12Q5T6F0 453 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 MOB3CQ70IA8 216 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 INO80EQ8NBZ0 244 aaPredicted RBP15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 NAXEQ8NCW5 288 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 HDHD3Q9BSH5 251 aaPredicted RBP15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CSAG2Q9Y5P2 127 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 LRRC3CA6NJW4 275 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZNF716A6NP11 495 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SPRY1O43609 319 aaPredicted RBP15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CRYGSP22914 178 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 NFYBP25208 207 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PSMB6P28072 239 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 H3F3CQ6NXT2 135 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SLC16A14Q7RTX9 510 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TMEM105Q8N8V8 129 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SEMA6DQ8NFY4 1073 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SF3B5Q9BWJ5 86 aaKnown RBP15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PIGMQ9H3S5 423 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZNF581Q9P0T4 197 aa15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 MCTS1Q9ULC4 181 aaKnown RBP15.99■□□□□ 0.15
CHRFAM7A-202ENST00000397827 FAM230AA0A1W2PPH8 454 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SYNGR3O43761 229 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PGAM2P15259 253 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZNF32P17041 273 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 RGS19P49795 217 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SLC23A3Q6PIS1 610 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 LHFPL1Q86WI0 220 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 BHLHE23Q8NDY6 225 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OR10D3Q8NH80 312 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 REEP6Q96HR9 211 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TCEAL7Q9BRU2 100 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PINLYPA6NC86 204 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 F5H0A9 414 aaPredicted RBP15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SFT2D2O95562 160 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 LCATP04180 440 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CPT2P23786 658 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 FPR2P25090 351 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CLDN15P56746 228 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 FABP9Q0Z7S8 132 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 C21orf62-AS1Q17RA5 79 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ANKRD55Q3KP44 614 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 AAED1Q7RTV5 226 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GPR137CQ8N3F9 429 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CT55Q8WUE5 264 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TMEM38BQ9NVV0 291 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 LOXL2Q9Y4K0 774 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CEACAM18A8MTB9 384 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 RAB35Q15286 201 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PEG10Q86TG7 708 aaKnown RBP15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 FGFBP3Q8TAT2 258 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DCUN1D4Q92564 292 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TM2D1Q9BX74 207 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PLEKHJ1Q9NW61 149 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OSGIN2Q9Y236 505 aa15.98■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TECTAO75443 2155 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CHRFAM7AQ494W8 412 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 UQCC3Q6UW78 93 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DRAM2Q6UX65 266 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 Q6ZSR3 168 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OR5AP2Q8NGF4 316 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OR1S2Q8NGQ3 325 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 OR1F12Q8NHA8 337 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 RHBDD1Q8TEB9 315 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZNF845Q96IR2 970 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CDC6Q99741 560 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TLNRD1Q9H1K6 362 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PCSK5Q92824 1860 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 IGKV1-27A0A075B6S5 117 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ARGFXA6NJG6 315 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 H0YIZ8 118 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 KNG1P01042 644 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 IGHV3-9P01782 118 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TAF9Q16594 264 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PLXDC2Q6UX71 529 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SSX9Q7RTT3 188 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SKA3Q8IX90 412 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ABHD3Q8WU67 409 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms