RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PACRGLQ8N7B6 248 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 OR5D13Q8NGL4 314 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 SSMEM1Q8WWF3 244 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 LHX4Q969G2 390 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 SPSB1Q96BD6 273 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 LGALS12Q96DT0 336 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 SEH1LQ96EE3 360 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 SLC29A1Q99808 456 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 FAM96BQ9Y3D0 163 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 FAM230AA0A1W2PPH8 454 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 RFPL4AA6NLU0 287 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 RFPL4AL1F8VTS6 287 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 IGHA1P01876 353 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 CCDC159P0C7I6 412 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 ZNF20P17024 532 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 RBP2P50120 134 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 OR12D2P58182 307 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 ERVK11-1P61568 191 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 ACSM1Q08AH1 577 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 UBE2V2Q15819 145 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 ODF4Q2M2E3 257 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 BRD3OSQ6XYD6 125 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 LHFPL2Q6ZUX7 228 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 CALHM1Q8IU99 346 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 TMEM185AQ8NFB2 350 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 CPNE2Q96FN4 548 aaPredicted RBP11.48□□□□□ -0.57
SEC13-204ENST00000397099 C4orf36Q96KX1 117 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 CEP19Q96LK0 163 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 ALG8Q9BVK2 526 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 JAM3Q9BX67 310 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 DPAGT1Q9H3H5 408 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 RHOFQ9HBH0 211 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 FRRS1LQ9P0K9 344 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 MAB21L2Q9Y586 359 aa11.48□□□□□ -0.57
SEC13-204ENST00000397099 A0A1B0GUS0 222 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 A0A1B0GW55 424 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 TMEM212A6NML5 194 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 POM121CA8CG34 1229 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 J3QLW9 94 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 SYNGR1O43759 233 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 MT-ND2P03891 347 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 CRYBA1P05813 215 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 CHRM2P08172 466 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 FBP1P09467 338 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 OCM2P0CE71 109 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 OCMP0CE72 109 aaPredicted RBP11.47□□□□□ -0.57
SEC13-204ENST00000397099 DUX4L2P0CJ85 424 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 DUX4L3P0CJ86 424 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 DUX4L4P0CJ87 422 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 DUX4L5P0CJ88 424 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 DUX4L6P0CJ89 424 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 DUX4L7P0CJ90 424 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 ZNF19P17023 458 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 KIR3DL2P43630 455 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 UBE2E1P51965 193 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 CAPZA1P52907 286 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 MED21Q13503 144 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 ALKBH1Q13686 389 aaKnown RBP11.47□□□□□ -0.57
SEC13-204ENST00000397099 DUX4L9Q6RFH8 374 aaPredicted RBP11.47□□□□□ -0.57
SEC13-204ENST00000397099 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 ZNRF1Q8ND25 227 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 SETD9Q8NE22 299 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 PELI1Q96FA3 418 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 C1orf147Q96MC9 270 aaPredicted RBP11.47□□□□□ -0.57
SEC13-204ENST00000397099 COMMD4Q9H0A8 199 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.47□□□□□ -0.57
SEC13-204ENST00000397099 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 GLS2Q9UI32 602 aa11.47□□□□□ -0.57
SEC13-204ENST00000397099 A6NIN4 97 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 HOXA3O43365 443 aaPredicted RBP11.46□□□□□ -0.57
SEC13-204ENST00000397099 ALX3O95076 343 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 DCKP27707 260 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 GBX2P52951 348 aaPredicted RBP11.46□□□□□ -0.57
SEC13-204ENST00000397099 RPL31P62899 125 aaKnown RBP11.46□□□□□ -0.57
SEC13-204ENST00000397099 IL18R1Q13478 541 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 ZNF676Q8N7Q3 588 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 OR5D14Q8NGL3 314 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 OR13C3Q8NGS6 347 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 FGF20Q9NP95 211 aaPredicted RBP11.46□□□□□ -0.57
SEC13-204ENST00000397099 ERVK13-1Q9NX77 482 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 SF3B6Q9Y3B4 125 aaKnown RBP11.46□□□□□ -0.57
SEC13-204ENST00000397099 PCDHGB5Q9Y5G0 923 aa11.46□□□□□ -0.57
SEC13-204ENST00000397099 PKD1L1Q8TDX9 2849 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 BTBD17A6NE02 478 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 OR4C45A6NMZ5 311 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 H0YAE9 185 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 K7N7A8 449 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 SPRY1O43609 319 aaPredicted RBP11.45□□□□□ -0.58
SEC13-204ENST00000397099 TK1P04183 234 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 MELTFP08582 738 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 SELLP14151 372 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 ATF1P18846 271 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 MTCP1P56278 107 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 NANOS3P60323 173 aaKnown RBP11.45□□□□□ -0.58
SEC13-204ENST00000397099 ELF3P78545 371 aaPredicted RBP11.45□□□□□ -0.58
SEC13-204ENST00000397099 CCDC58Q4VC31 144 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 MIDNQ504T8 468 aa11.45□□□□□ -0.58
SEC13-204ENST00000397099 DMRTC1Q5HYR2 192 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms