RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PRAMEF6Q5VXH4 476 aa17.33■□□□□ 0.37
VCPKMT-202ENST00000395860 CHST4Q8NCG5 386 aa17.33■□□□□ 0.37
VCPKMT-202ENST00000395860 OR10R2Q8NGX6 335 aa17.33■□□□□ 0.37
VCPKMT-202ENST00000395860 TMEM204Q9BSN7 226 aa17.33■□□□□ 0.37
VCPKMT-202ENST00000395860 ZDHHC8Q9ULC8 765 aa17.33■□□□□ 0.37
VCPKMT-202ENST00000395860 PLCE1Q9P212 2302 aa17.33■□□□□ 0.37
VCPKMT-202ENST00000395860 CHD3Q12873 2000 aaKnown RBP17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 A6NLC8 198 aa17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 CTDSPLO15194 276 aa17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 IL7P13232 177 aa17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 ZNF672Q499Z4 452 aaPredicted RBP17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 RNASE12Q5GAN4 147 aaKnown RBP17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 FAM89BQ8N5H3 189 aa17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 LILRB1Q8NHL6 650 aaPredicted RBP17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 Q96M66 194 aa17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 NUDT16L1Q9BRJ7 211 aaKnown RBP17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 RBFOX1Q9NWB1 397 aaKnown RBP17.33■□□□□ 0.36
VCPKMT-202ENST00000395860 WIPF3A6NGB9 483 aa17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 PTHLHP12272 177 aa17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 IGFBP2P18065 325 aa17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 TRIQKQ629K1 86 aa17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 ELP2Q6IA86 826 aa17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 FBXL14Q8N1E6 418 aa17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 GCDHQ92947 438 aaPredicted RBP17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 DHRS9Q9BPW9 319 aa17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 ST3GAL6Q9Y274 331 aa17.32■□□□□ 0.36
VCPKMT-202ENST00000395860 M0R233 179 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 SOCS1O15524 211 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 TNFSF4P23510 183 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 GABRR1P24046 479 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 MRPS10P82664 201 aaKnown RBP17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 DGCR2P98153 550 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 STEAP3Q658P3 488 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 LYSMD2Q8IV50 215 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 Q8NFD4 153 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 ZNF488Q96MN9 340 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 OR2V2Q96R30 315 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 THAP7Q9BT49 309 aaPredicted RBP17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 TLNRD1Q9H1K6 362 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 ZMAT3Q9HA38 289 aaKnown RBP17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 UFSP2Q9NUQ7 469 aa17.31■□□□□ 0.36
VCPKMT-202ENST00000395860 ANKHD1Q8IWZ3 2542 aaKnown RBP17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 F8VVB4 439 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 F8VWA3 439 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 IGHV1-46P01743 117 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 RNF224P0DH78 156 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 SRP9P49458 86 aaKnown RBP17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 FGF12P61328 243 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 MPPED2Q15777 294 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 TAF9Q16594 264 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 PIGYQ3MUY2 71 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 C11orf53Q8IXP5 236 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 CELF2-AS1Q8N7Q2 184 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 SMIM4Q8WVI0 70 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 FCAMRQ8WWV6 532 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 RAB3CQ96E17 227 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 MEGF10Q96KG7 1140 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 AUNIPQ9H7T9 357 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 SPTBN1Q01082 2364 aaKnown RBP17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 B9A039 149 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 GABARAPH6UMI1 98 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 GSTZ1O43708 216 aaPredicted RBP17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 BLVRBP30043 206 aaPredicted RBP17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 INPP1P49441 399 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 RBM11P57052 281 aaKnown RBP17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 TNFAIP6P98066 277 aaPredicted RBP17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 EFNB3Q15768 340 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 ZNF826PQ6ZT77 177 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 Q8IYB0 196 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 ITLN1Q8WWA0 313 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 DIRC2Q96SL1 478 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 RHOFQ9HBH0 211 aa17.3■□□□□ 0.36
VCPKMT-202ENST00000395860 ICE1Q9Y2F5 2266 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 A0A1W2PQ09 198 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 GEMIN2O14893 280 aaKnown RBP17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 AKR7A2O43488 359 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 PTBP3O95758 552 aaKnown RBP17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 GNB3P16520 340 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 PRKACAP17612 351 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 PRSS3P35030 304 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 SNU13P55769 128 aaKnown RBP17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 TMEM50BP56557 158 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 SCN1BQ07699 218 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 ZNF260Q3ZCT1 412 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 CDNFQ49AH0 187 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 MEX3BQ6ZN04 569 aaKnown RBP17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 Q6ZTK2 550 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 FAM58AQ8N1B3 248 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 C19orf18Q8NEA5 215 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 EMG1Q92979 244 aaKnown RBP17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 IL19Q9UHD0 177 aa17.29■□□□□ 0.36
VCPKMT-202ENST00000395860 hCG_1807616A0A1W2PRN6 198 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 MEIOCA2RUB1 952 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 TMEM235A6NFC5 223 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 C17orf100A8MU93 164 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 CD3GP09693 182 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 PGA5P0DJD9 388 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 PLAC9Q5JTB6 97 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 WDR82Q6UXN9 313 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 MUC15Q8N387 334 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms