RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TAS2R46P59540 309 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 YPEL5P62699 121 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 MRPS21P82921 87 aaKnown RBP12.54□□□□□ -0.4
CLIP2-203ENST00000395060 OPN5Q6U736 354 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 OR1J1Q8NGS3 322 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 GPR61Q9BZJ8 451 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 DOK5Q9P104 306 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 IFNA17P01571 189 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 HOXC4P09017 264 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-203ENST00000395060 LYL1P12980 280 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 RTN4IP1Q8WWV3 396 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-203ENST00000395060 KLHDC7BQ96G42 594 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 SHDQ96IW2 340 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 TMPRSS5Q9H3S3 457 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 LIPGQ9Y5X9 500 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 THADAQ6YHU6 1953 aa12.54□□□□□ -0.4
CLIP2-203ENST00000395060 BORCS7-ASMTA0A0B4J1R7 106 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 PPIHO43447 177 aaKnown RBP12.53□□□□□ -0.4
CLIP2-203ENST00000395060 CST7O76096 145 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 CXCL1P09341 107 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 PRF1P14222 555 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 OR1D5P58170 312 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 RUNX1Q01196 453 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 UEVLDQ8IX04 471 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 OR14K1Q8NGZ2 314 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 TCEAL7Q9BRU2 100 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 PIGLQ9Y2B2 252 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 CYB5BO43169 146 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 PHF1O43189 567 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-203ENST00000395060 SCGNO76038 276 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 IFI6P09912 130 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 DANCRP0C864 163 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 FBLP22087 321 aaKnown RBP12.53□□□□□ -0.4
CLIP2-203ENST00000395060 NSUN5P2Q63ZY6 315 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 FBRSQ9HAH7 460 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 ZNF160Q9HCG1 818 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 WNT16Q9UBV4 365 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 MMP17Q9ULZ9 603 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 DMDP11532 3685 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 H3BMH7 237 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 GPX4P36969 197 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-203ENST00000395060 UBE2KP61086 200 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 HSD11B2P80365 405 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 OR1L3Q8NH93 324 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 TMEM234Q8WY98 164 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 ZDHHC8Q9ULC8 765 aa12.53□□□□□ -0.4
CLIP2-203ENST00000395060 FIGNL2A6NMB9 653 aa12.52□□□□□ -0.4
CLIP2-203ENST00000395060 FOLR1P15328 257 aa12.52□□□□□ -0.4
CLIP2-203ENST00000395060 PRAMEF20Q5VT98 475 aa12.52□□□□□ -0.4
CLIP2-203ENST00000395060 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.4
CLIP2-203ENST00000395060 CCDC54Q8NEL0 328 aa12.52□□□□□ -0.4
CLIP2-203ENST00000395060 OR2G3Q8NGZ4 309 aa12.52□□□□□ -0.4
CLIP2-203ENST00000395060 SUCNR1Q9BXA5 334 aa12.52□□□□□ -0.4
CLIP2-203ENST00000395060 B3GAT1Q9P2W7 334 aa12.52□□□□□ -0.4
CLIP2-203ENST00000395060 TRGC2P03986 189 aa12.52□□□□□ -0.41
CLIP2-203ENST00000395060 CHATP28329 748 aa12.52□□□□□ -0.41
CLIP2-203ENST00000395060 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.41
CLIP2-203ENST00000395060 CLEC12BQ2HXU8 276 aa12.52□□□□□ -0.41
CLIP2-203ENST00000395060 OR1N1Q8NGS0 311 aa12.52□□□□□ -0.41
CLIP2-203ENST00000395060 RAB39BQ96DA2 213 aa12.52□□□□□ -0.41
CLIP2-203ENST00000395060 LYZL4Q96KX0 146 aa12.52□□□□□ -0.41
CLIP2-203ENST00000395060 SLC7A11Q9UPY5 501 aa12.52□□□□□ -0.41
CLIP2-203ENST00000395060 G3V3Y1 287 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 FABP4P15090 132 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 CSNK1EP49674 416 aaKnown RBP12.51□□□□□ -0.41
CLIP2-203ENST00000395060 RAB5CP51148 216 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 FAM3AP98173 230 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 SMAD4Q13485 552 aaKnown RBP12.51□□□□□ -0.41
CLIP2-203ENST00000395060 TMEM123Q8N131 208 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 Q8WTZ3 238 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 SCRT1Q9BWW7 348 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 TWSG1Q9GZX9 223 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 H3BP45 60 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 H3BQ15 152 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 MSTNO14793 375 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF728P0DKX0 622 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 PLA2G5P39877 138 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 MTCP1P56278 107 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 RNF4P78317 190 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 TMEM176BQ3YBM2 270 aaPredicted RBP12.51□□□□□ -0.41
CLIP2-203ENST00000395060 UBAC2Q8NBM4 344 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 SMRP1Q8NCR6 262 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 DDIT4LQ96D03 193 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 SMOC1Q9H4F8 434 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 KCNIP3Q9Y2W7 256 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 HS3ST3B1Q9Y662 390 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 DIDO1Q9BTC0 2240 aaKnown RBP12.51□□□□□ -0.41
CLIP2-203ENST00000395060 ZNF407Q9C0G0 2248 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 LIPT2A6NK58 231 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 IGHG1P01857 330 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 PATE4P0C8F1 98 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 HTR5AP47898 357 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 CLDN17P56750 224 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 ERVFRD-1P60508 538 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 GAMTQ14353 236 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 PIGYQ3MUY2 71 aa12.51□□□□□ -0.41
CLIP2-203ENST00000395060 CYB561D1Q8N8Q1 229 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms