RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SPRY1O43609 319 aaPredicted RBP16.57■□□□□ 0.24
SNCA-203ENST00000394986 HCKP08631 526 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 HSMCR30P0CW71 290 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 Q499Y3 187 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 FAM120AOSQ5T036 256 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 FAHD2BQ6P2I3 314 aaPredicted RBP16.57■□□□□ 0.24
SNCA-203ENST00000394986 ACP7Q6ZNF0 438 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 ANGPTL6Q8NI99 470 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 C12orf43Q96C57 262 aaKnown RBP16.57■□□□□ 0.24
SNCA-203ENST00000394986 FAHD2AQ96GK7 314 aa16.57■□□□□ 0.24
SNCA-203ENST00000394986 OR2AT4A6NND4 320 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 NDUFA2O43678 99 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 NOS1APO75052 506 aaPredicted RBP16.56■□□□□ 0.24
SNCA-203ENST00000394986 NXPH2O95156 264 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 RAB3AP20336 220 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 CEBPDP49716 269 aaPredicted RBP16.56■□□□□ 0.24
SNCA-203ENST00000394986 GABARAPL2P60520 117 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 INSL4Q14641 139 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 ZNF529Q6P280 563 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 CEP19Q96LK0 163 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 GAFA1Q96PS6 74 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 TMED9Q9BVK6 235 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 ZFHX3Q15911 3703 aa16.56■□□□□ 0.24
SNCA-203ENST00000394986 NIPBLQ6KC79 2804 aaeCLIP16.56■□□□□ 0.24
SNCA-203ENST00000394986 IGKV1D-17A0A075B6S4 117 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 DVL1O14640 695 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 ANGPTL7O43827 346 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 CD1AP06126 327 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 PSG2P11465 335 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 GABRA2P47869 451 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 ERVK11-1P61568 191 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 IKZF1Q13422 519 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 TBCEQ15813 527 aaPredicted RBP16.55■□□□□ 0.24
SNCA-203ENST00000394986 SMIM21Q3B7S5 101 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 DCAF12L2Q5VW00 463 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 LIPKQ5VXJ0 399 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 HES4Q9HCC6 221 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 TMEM160Q9NX00 188 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 KAAG1Q9UBP8 84 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 OR5V1Q9UGF6 321 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 ZNF222Q9UK12 451 aa16.55■□□□□ 0.24
SNCA-203ENST00000394986 TRBV5-7A0A0A0MS05 114 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 IGKV1-12A0A0C4DH73 117 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 A0A0G2JMP0 313 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 A0A0X1KG70 313 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 ZNF879B4DU55 563 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 C22orf46C9J442 243 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 CRLF1O75462 422 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 ALX3O95076 343 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 IGKV1D-12P01611 117 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 CALCBP10092 127 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 BCL3P20749 454 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 NPBWR2P48146 333 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 PDZK1IP1Q13113 114 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 KISS1Q15726 138 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 ZNF788Q6ZQV5 615 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 OR4M2Q8NGB6 313 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 OR52N4Q8NGI2 321 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 UFD1Q92890 307 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 TMPRSS13Q9BYE2 586 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 SHARPINQ9H0F6 387 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 RASL12Q9NYN1 266 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 IL36RNQ9UBH0 155 aa16.54■□□□□ 0.24
SNCA-203ENST00000394986 POLR3KQ9Y2Y1 108 aaPredicted RBP16.54■□□□□ 0.24
SNCA-203ENST00000394986 TRAV8-7A0A075B6U6 113 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 MAGEA13PA6NCF6 341 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 NKX6-3A6NJ46 265 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 RFPL4AA6NLU0 287 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 RFPL4AL1F8VTS6 287 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 PIN1P1O15428 100 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 AVPP01185 164 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 HOXB4P17483 251 aaPredicted RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 CPT2P23786 658 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 PPP3R1P63098 170 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 PAX2Q02962 417 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 EMX1Q04741 257 aaPredicted RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 DGUOKQ16854 277 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 ATPAF1Q5TC12 328 aaPredicted RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 C1orf229Q6ZS94 237 aaPredicted RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 SLC36A1Q7Z2H8 476 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 ST8SIA4Q92187 359 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 DERL3Q96Q80 235 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 BEX2Q9BXY8 128 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 NEK6Q9HC98 313 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 ACOT13Q9NPJ3 140 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 RBFOX1Q9NWB1 397 aaKnown RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 OR14J1Q9UGF5 321 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 METRNQ9UJH8 293 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 ARHGAP32A7KAX9 2087 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 LOC105371242A0A075B767 164 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 ACAA1P09110 424 aaPredicted RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 IGFBP3P17936 291 aaPredicted RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 ZP1P60852 638 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 SATL1Q86VE3 508 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 MKXQ8IYA7 352 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 CD177Q8N6Q3 437 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 EMG1Q92979 244 aaKnown RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 TMEM203Q969S6 136 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 DACT3Q96B18 629 aaPredicted RBP16.53■□□□□ 0.24
SNCA-203ENST00000394986 MGLLQ99685 303 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms