RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 SERPINF1P36955 418 aa16.1■□□□□ 0.17
SIL1-202ENST00000394817 ECI1P42126 302 aa16.1■□□□□ 0.17
SIL1-202ENST00000394817 PDZK1IP1Q13113 114 aa16.1■□□□□ 0.17
SIL1-202ENST00000394817 RNPS1Q15287 305 aaKnown RBP16.1■□□□□ 0.17
SIL1-202ENST00000394817 ZSCAN4Q8NAM6 433 aaPredicted RBP16.1■□□□□ 0.17
SIL1-202ENST00000394817 PRRX2Q99811 253 aa16.1■□□□□ 0.17
SIL1-202ENST00000394817 HDHD3Q9BSH5 251 aaPredicted RBP16.1■□□□□ 0.17
SIL1-202ENST00000394817 PRRG4Q9BZD6 226 aa16.1■□□□□ 0.17
SIL1-202ENST00000394817 RAB18Q9NP72 206 aa16.1■□□□□ 0.17
SIL1-202ENST00000394817 RDH8Q9NYR8 311 aa16.1■□□□□ 0.17
SIL1-202ENST00000394817 SPDEFO95238 335 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 ACTL6AO96019 429 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 PDGFAP04085 211 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 RPS2P15880 293 aaKnown RBP16.09■□□□□ 0.17
SIL1-202ENST00000394817 PI3P19957 117 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 DTYMKP23919 212 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 PPIAP62937 165 aaKnown RBP16.09■□□□□ 0.17
SIL1-202ENST00000394817 ACOT7LQ6ZUV0 252 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 ZFP62Q8NB50 900 aaPredicted RBP16.09■□□□□ 0.17
SIL1-202ENST00000394817 OR5M9Q8NGP3 310 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 THAP6Q8TBB0 222 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 APH1AQ96BI3 265 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 ACKR4Q9NPB9 350 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 hCG_1807616A0A1W2PRN6 198 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 C5orf51A6NDU8 294 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 EEF1E1-BLOC1S5C9J1V9 151 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 SHOXO15266 292 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 BCL2L11O43521 198 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 CYCSP99999 105 aaKnown RBP16.09■□□□□ 0.17
SIL1-202ENST00000394817 C9orf135Q5VTT2 229 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 RGS7BPQ6MZT1 257 aaPredicted RBP16.09■□□□□ 0.17
SIL1-202ENST00000394817 MOB3CQ70IA8 216 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 OSR2Q8N2R0 312 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 COQ8AQ8NI60 647 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 PIGCQ92535 297 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 FAAP24Q9BTP7 215 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 CHMP1AQ9HD42 196 aaPredicted RBP16.09■□□□□ 0.17
SIL1-202ENST00000394817 AK3Q9UIJ7 227 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 ANXA10Q9UJ72 324 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 ASPMQ8IZT6 3477 aa16.09■□□□□ 0.17
SIL1-202ENST00000394817 A0A096LPE4 126 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 A0A1W2PPZ6 126 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 KANTRA0A1W2PQU2 76 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 RLN2P04090 185 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 CD82P27701 267 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 FOXG1P55316 489 aaPredicted RBP16.08■□□□□ 0.16
SIL1-202ENST00000394817 ARPC4P59998 168 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 SLC9A3R2Q15599 337 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 OR10AD1Q8NGE0 317 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 ST8SIA2Q92186 375 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 VRK1Q99986 396 aaPredicted RBP16.08■□□□□ 0.16
SIL1-202ENST00000394817 DECR2Q9NUI1 292 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 ZNF581Q9P0T4 197 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 MBD2Q9UBB5 411 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 CUL9Q8IWT3 2517 aa16.08■□□□□ 0.16
SIL1-202ENST00000394817 GEMIN2O14893 280 aaKnown RBP16.07■□□□□ 0.16
SIL1-202ENST00000394817 HLA-HP01893 362 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 CD46P15529 392 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 GLRA1P23415 457 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 PSMB6P28072 239 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 C3AR1Q16581 482 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 ANKRD55Q3KP44 614 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 PIGYQ3MUY2 71 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 RBPMSQ93062 196 aaKnown RBP16.07■□□□□ 0.16
SIL1-202ENST00000394817 CXorf58Q96LI9 332 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 CMSS1Q9BQ75 279 aaKnown RBP16.07■□□□□ 0.16
SIL1-202ENST00000394817 SULT4A1Q9BR01 284 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 REPIN1Q9BWE0 567 aaKnown RBP16.07■□□□□ 0.16
SIL1-202ENST00000394817 REG4Q9BYZ8 158 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 PCDHB16Q9NRJ7 776 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 LIPGQ9Y5X9 500 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 TRBV6-7A0A0A0MS04 114 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 C13orf42A0A1B0GVH6 325 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 ZNF503-AS2A6NEH8 195 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 ARGFXA6NJG6 315 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 SFTPBP07988 381 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 FCGR3AP08637 254 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 NOVA1P51513 510 aaKnown RBP16.07■□□□□ 0.16
SIL1-202ENST00000394817 SLC10A1Q14973 349 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 ATXN7L3Q14CW9 347 aaPredicted RBP16.07■□□□□ 0.16
SIL1-202ENST00000394817 FBXL14Q8N1E6 418 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 WDR13Q9H1Z4 485 aa16.07■□□□□ 0.16
SIL1-202ENST00000394817 C14orf166Q9Y224 244 aaKnown RBP16.07■□□□□ 0.16
SIL1-202ENST00000394817 SS18L1O75177 396 aaPredicted RBP16.06■□□□□ 0.16
SIL1-202ENST00000394817 RBM11P57052 281 aaKnown RBP16.06■□□□□ 0.16
SIL1-202ENST00000394817 OR56B2PQ8NGI1 322 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 OR51F2Q8NH61 342 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 POM121Q96HA1 1249 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 ZNF2Q9BSG1 426 aaPredicted RBP16.06■□□□□ 0.16
SIL1-202ENST00000394817 SDHAF2Q9NX18 166 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 ST3GAL6Q9Y274 331 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 CEP250Q9BV73 2442 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 C5orf49A4QMS7 147 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 MFSD2BA6NFX1 497 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 POM121CA8CG34 1229 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 ZNF850A8MQ14 1090 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 TM4SF5O14894 197 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 PGAM2P15259 253 aa16.06■□□□□ 0.16
SIL1-202ENST00000394817 ARR3P36575 388 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms