RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 INSM1Q01101 510 aaPredicted RBP16.58■□□□□ 0.24
HOXC6-202ENST00000394331 SLC22A24Q8N4F4 322 aa16.58■□□□□ 0.24
HOXC6-202ENST00000394331 PTPMT1Q8WUK0 201 aaPredicted RBP16.58■□□□□ 0.24
HOXC6-202ENST00000394331 LPAR4Q99677 370 aa16.58■□□□□ 0.24
HOXC6-202ENST00000394331 ZNF705GA8MUZ8 300 aaPredicted RBP16.57■□□□□ 0.24
HOXC6-202ENST00000394331 SCAF4O95104 1147 aaKnown RBP16.57■□□□□ 0.24
HOXC6-202ENST00000394331 OPN1MWP04001 364 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 OPN1MW2P0DN77 364 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 OPN1MW3P0DN78 364 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 PI3P19957 117 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 PPP1R14AQ96A00 147 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 ACY3Q96HD9 319 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 CHRNA10Q9GZZ6 450 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 NXF5Q9H1B4 397 aaKnown RBP16.57■□□□□ 0.24
HOXC6-202ENST00000394331 PNO1Q9NRX1 252 aaKnown RBP16.57■□□□□ 0.24
HOXC6-202ENST00000394331 LRFN1Q9P244 771 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 R4GMQ9 66 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 TMEM150CB9EJG8 249 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 PRKNO60260 465 aaPredicted RBP16.57■□□□□ 0.24
HOXC6-202ENST00000394331 CDC14BO60729 498 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 CCKARP32238 428 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 SLC6A8P48029 635 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 GNG10P50151 68 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 PAX5Q02548 391 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 EGR4Q05215 589 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 RPL18Q07020 188 aaKnown RBP16.57■□□□□ 0.24
HOXC6-202ENST00000394331 ICAM4Q14773 271 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 ANGPTL4Q9BY76 406 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 LSM5Q9Y4Y9 91 aaKnown RBP16.57■□□□□ 0.24
HOXC6-202ENST00000394331 WSB1Q9Y6I7 421 aa16.57■□□□□ 0.24
HOXC6-202ENST00000394331 LOC107986453A0A1B0GWG9 222 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 A8MVM7 634 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 PPP5D1E7EU14 171 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 CYB5R3P00387 301 aaPredicted RBP16.56■□□□□ 0.24
HOXC6-202ENST00000394331 OR3A1P47881 315 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 TAS2R46P59540 309 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 C1QL3Q5VWW1 255 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 SMRP1Q8NCR6 262 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 OR4X1Q8NH49 305 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 TAAR8Q969N4 342 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 SRD5A3Q9H8P0 318 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 B9D1Q9UPM9 204 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 FRG2CA6NGY1 282 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 SHISA7A6NL88 538 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 H7C1C5 153 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 GLRA1P23415 457 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 PTGER4P35408 488 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 LCN6P62502 163 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 LANCL2Q9NS86 450 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 C14orf166Q9Y224 244 aaKnown RBP16.56■□□□□ 0.24
HOXC6-202ENST00000394331 SLC5A6Q9Y289 635 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 LNP1A1A4G5 178 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 A6NIZ1 184 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 RGS19P49795 217 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 RAP1BP61224 184 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 FOXF1Q12946 379 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 HERPUD1Q15011 391 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 TMEM182Q6ZP80 229 aaPredicted RBP16.56■□□□□ 0.24
HOXC6-202ENST00000394331 Q6ZS52 159 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 CYB561D1Q8N8Q1 229 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 OR2I1PQ8NGU4 316 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 LMX1AQ8TE12 382 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 SPOCK3Q9BQ16 436 aa16.56■□□□□ 0.24
HOXC6-202ENST00000394331 RIMS4Q9H426 269 aaPredicted RBP16.56■□□□□ 0.24
HOXC6-202ENST00000394331 IGHV5-51A0A0C4DH38 117 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 GEMIN2O14893 280 aaKnown RBP16.55■□□□□ 0.24
HOXC6-202ENST00000394331 HIST1H1DP16402 221 aaKnown RBP16.55■□□□□ 0.24
HOXC6-202ENST00000394331 ZNF774Q6NX45 483 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 OR10A7Q8NGE5 316 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 RBMXL1Q96E39 390 aaKnown RBP16.55■□□□□ 0.24
HOXC6-202ENST00000394331 CTDSP1Q9GZU7 261 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 CBLN4Q9NTU7 201 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 LRP12Q9Y561 859 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 HEATR5AQ86XA9 2040 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 A0A1B0GU03 582 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 SOX15O60248 233 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 GFERP55789 205 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 CCL20P78556 96 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 IL13RA2Q14627 380 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 FAM189A2Q15884 450 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 C4orf17Q53FE4 359 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 ZNF321PQ8N8H1 164 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 ADOQ96SZ5 270 aa16.55■□□□□ 0.24
HOXC6-202ENST00000394331 EMP2P54851 167 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 PTCRAQ6ISU1 281 aaPredicted RBP16.54■□□□□ 0.24
HOXC6-202ENST00000394331 NPRL2Q8WTW4 380 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 LPAR5Q9H1C0 372 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 C2CD4DB7Z1M9 353 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 ETV2O00321 342 aaPredicted RBP16.54■□□□□ 0.24
HOXC6-202ENST00000394331 GIMD1P0DJR0 217 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 FUT3P21217 361 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 NOVA1P51513 510 aaKnown RBP16.54■□□□□ 0.24
HOXC6-202ENST00000394331 DCAF7P61962 342 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 PLXDC2Q6UX71 529 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 G6PC2Q9NQR9 355 aa16.54■□□□□ 0.24
HOXC6-202ENST00000394331 MBPP02686 304 aaPredicted RBP16.53■□□□□ 0.24
HOXC6-202ENST00000394331 BPIFB3P59826 476 aa16.53■□□□□ 0.24
HOXC6-202ENST00000394331 TAF9Q16594 264 aa16.53■□□□□ 0.24
HOXC6-202ENST00000394331 C1orf140Q5VVS0 124 aa16.53■□□□□ 0.24
HOXC6-202ENST00000394331 TMEM18Q96B42 140 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms