RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 DMBX1Q8NFW5 382 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 NTNG2Q96CW9 530 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 PLEKHA2Q9HB19 425 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 NECAP2Q9NVZ3 263 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 A0A0J9YW62 118 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 FAM230AA0A1W2PPH8 454 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 ZNF98A6NK75 572 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 OPRM1P35372 400 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 DVL1P1P54792 670 aaPredicted RBP16.4■□□□□ 0.22
CBX1-202ENST00000393408 RAB35Q15286 201 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 AVPI1Q5T686 147 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 REEP6Q96HR9 211 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 IMMP1LQ96LU5 166 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 CMSS1Q9BQ75 279 aaKnown RBP16.4■□□□□ 0.22
CBX1-202ENST00000393408 SULT4A1Q9BR01 284 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 ARV1Q9H2C2 271 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 BIN3Q9NQY0 253 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 DKKL1Q9UK85 242 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 ARID1AO14497 2285 aa16.4■□□□□ 0.22
CBX1-202ENST00000393408 G3V3Y1 287 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 K7ESF4 209 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 GDF9O60383 454 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 SCGB1D2O95969 90 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 OR8U9P0C7N5 309 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 ZNF728P0DKX0 622 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 SPP1P10451 314 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 AKR1D1P51857 326 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 HGFACQ04756 655 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 TMEM187Q14656 261 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 FAM76BQ5HYJ3 339 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 OR8U1Q8NH10 309 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 ERGIC1Q969X5 290 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 KIRREL1Q96J84 757 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 ESRP2Q9H6T0 727 aaKnown RBP16.39■□□□□ 0.21
CBX1-202ENST00000393408 NAA60Q9H7X0 242 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 NXT1Q9UKK6 140 aaKnown RBP16.39■□□□□ 0.21
CBX1-202ENST00000393408 ZNF850A8MQ14 1090 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 TNFSF11O14788 317 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 SGCEO43556 437 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 SYNGR3O43761 229 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 MBPP02686 304 aaPredicted RBP16.39■□□□□ 0.21
CBX1-202ENST00000393408 CHATP28329 748 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 SP6Q3SY56 376 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 ASCL4Q6XD76 172 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 SKA3Q8IX90 412 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 TOMM40LQ969M1 308 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 GALNT14Q96FL9 552 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 SRXN1Q9BYN0 137 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 SH2D2AQ9NP31 389 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 KCNIP3Q9Y2W7 256 aa16.39■□□□□ 0.21
CBX1-202ENST00000393408 TERTO14746 1132 aaKnown RBP16.38■□□□□ 0.21
CBX1-202ENST00000393408 UMODP07911 640 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 OR5AC1P0C628 307 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 CNN3Q15417 329 aaKnown RBP16.38■□□□□ 0.21
CBX1-202ENST00000393408 SAP25Q8TEE9 199 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 BSCL2Q96G97 398 aaPredicted RBP16.38■□□□□ 0.21
CBX1-202ENST00000393408 JSRP1Q96MG2 331 aaPredicted RBP16.38■□□□□ 0.21
CBX1-202ENST00000393408 ZNF700Q9H0M5 742 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
CBX1-202ENST00000393408 WDR87Q6ZQQ6 2873 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 COLCA2A8K830 154 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 E5RGE8 158 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 ZNF205O95201 554 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 FGF5P12034 268 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 COX6A1P12074 109 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 PEA15Q15121 130 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 ZNF774Q6NX45 483 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 MARS2Q96GW9 593 aaKnown RBP16.38■□□□□ 0.21
CBX1-202ENST00000393408 NSG2Q9Y328 171 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 PI4KAP42356 2102 aa16.38■□□□□ 0.21
CBX1-202ENST00000393408 RAC1P63000 192 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 SWI5Q1ZZU3 235 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 GPR137CQ8N3F9 429 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 LRTM2Q8N967 370 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 RTN4IP1Q8WWV3 396 aaPredicted RBP16.37■□□□□ 0.21
CBX1-202ENST00000393408 DYRK2Q92630 601 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 PQLC2LA1A4F0 135 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 SSR4P51571 173 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 PRSS12P56730 875 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 EXT1Q16394 746 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 ABCA11PQ4W5N1 156 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 OR1F12Q8NHA8 337 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 COA4Q9NYJ1 87 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 CACFD1Q9UGQ2 172 aa16.37■□□□□ 0.21
CBX1-202ENST00000393408 H7C1Q1 480 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 CST2P09228 141 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 RBP2P50120 134 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 CLEC9AQ6UXN8 241 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 LHFPL2Q6ZUX7 228 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 LYZL2Q7Z4W2 148 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 TDHQ8IZJ6 230 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 AKR1E2Q96JD6 320 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 SF3B5Q9BWJ5 86 aaKnown RBP16.36■□□□□ 0.21
CBX1-202ENST00000393408 SUCNR1Q9BXA5 334 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 FAM212BQ9NTI7 297 aaPredicted RBP16.36■□□□□ 0.21
CBX1-202ENST00000393408 STARD10Q9Y365 291 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 TIMM10BQ9Y5J6 103 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 IGKV1-12A0A0C4DH73 117 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 IGKV1D-12P01611 117 aa16.36■□□□□ 0.21
CBX1-202ENST00000393408 CXCL12P48061 93 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms