RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NRIP2Q9BQI9 281 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 C8orf4Q9NR00 106 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 INPP5EQ9NRR6 644 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 MTCH1Q9NZJ7 389 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 ONECUT1Q9UBC0 465 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 KAAG1Q9UBP8 84 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR14J1Q9UGF5 321 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF222Q9UK12 451 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 HHLA2Q9UM44 414 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 DIMT1Q9UNQ2 313 aaKnown RBP6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 SLC7A11Q9UPY5 501 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 MAB21L2Q9Y586 359 aa6.34□□□□□ -1.39
HMGB3P1-201ENST00000393368 ATRQ13535 2644 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 TRBV2A0A0J9YWF9 115 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 PNMA8CA0A1B0GUJ8 204 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 RFPL4AA6NLU0 287 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF879B4DU55 563 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 RFPL4AL1F8VTS6 287 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 SIGLEC5O15389 551 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 ANGPTL7O43827 346 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 TOX4O94842 621 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 NXPH2O95156 264 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 SERPINA3P01011 423 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 ACAA1P09110 424 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 MMP9P14780 707 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 ATF1P18846 271 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 MYL12AP19105 171 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 BCL3P20749 454 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 CPT2P23786 658 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 MPZP25189 248 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 AZGP1P25311 298 aaKnown RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 DCKP27707 260 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 C21orf33P30042 268 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 NPBWR2P48146 333 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 FUT6P51993 359 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 CAPZA1P52907 286 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 GBX2P52951 348 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 IL13RA1P78552 427 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 ST3GAL4Q11206 333 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 CDK5R1Q15078 307 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 CNN3Q15417 329 aaKnown RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 LRRC10Q5BKY1 277 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 ATPAF1Q5TC12 328 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 CD276Q5ZPR3 534 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 ASPHD2Q6ICH7 369 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 SLC25A26Q70HW3 274 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR5AK2Q8NH90 309 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 FBLIM1Q8WUP2 373 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 PP6455Q8WZ26 134 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 UPRTQ96BW1 309 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 BORCS8Q96FH0 119 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 MRPL48Q96GC5 212 aaKnown RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 WDFY2Q96P53 400 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 OPALINQ96PE5 141 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 C19orf24Q9BVV8 132 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 JAM3Q9BX67 310 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 PKIBQ9C010 78 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 SIRPDQ9H106 197 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 VCXQ9H320 206 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 HES4Q9HCC6 221 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 RBFOX1Q9NWB1 397 aaKnown RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 TAS2R4Q9NYW5 299 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 SLC25A10Q9UBX3 287 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 RPUSD1Q9UJJ7 312 aaKnown RBP6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 NUP50Q9UKX7 468 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 DHDHQ9UQ10 334 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 POLDIP2Q9Y2S7 368 aa6.33□□□□□ -1.4
HMGB3P1-201ENST00000393368 IGKV1-12A0A0C4DH73 117 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 A0A1W2PRD5 423 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 A0A1W2PRF3 423 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 A0A1W2PRM7 423 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 TMEM212A6NML5 194 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 H0YHG0 523 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 NOS1APO75052 506 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 IGKV1D-12P01611 117 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 CCDC159P0C7I6 412 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 OCM2P0CE71 109 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 OCMP0CE72 109 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 PPIAL4GP0DN37 164 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 PIPP12273 146 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 DUSP1P28562 367 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 PRDX2P32119 198 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 RBP2P50120 134 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 MTCP1P56278 107 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 ERVK11-1P61568 191 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 IL24Q13007 206 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 KLRD1Q13241 179 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 SMIM21Q3B7S5 101 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 METTL11BQ5VVY1 283 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 CRIP3Q6Q6R5 217 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 TMPRSS11AQ6ZMR5 421 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 VMO1Q7Z5L0 202 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 FAM185AQ8N0U4 392 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 PNKDQ8N490 385 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 TEX29Q8N6K0 151 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZDHHC22Q8N966 263 aa6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 PNLDC1Q8NA58 520 aaKnown RBP6.32□□□□□ -1.4
HMGB3P1-201ENST00000393368 LY6G5BQ8NDX9 201 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms