RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PNLDC1Q8NA58 520 aaKnown RBP11.12□□□□□ -0.63
USP44-202ENST00000393091 SLC25A46Q96AG3 418 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 CNTD2Q9H8S5 307 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 IFITM5A6NNB3 132 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 BTG1P62324 171 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 DGUOKQ16854 277 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 DCDC5Q6ZRR9 648 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 FAM89BQ8N5H3 189 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 PIMREGQ9BSJ6 248 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 NXF2Q9GZY0 626 aaKnown RBP11.12□□□□□ -0.63
USP44-202ENST00000393091 CCDC59Q9P031 241 aaKnown RBP11.12□□□□□ -0.63
USP44-202ENST00000393091 STEAP1Q9UHE8 339 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 RTTNQ86VV8 2226 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 OOEPA6NGQ2 149 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 A6NHS1 94 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 H3BUI4 141 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 TPPPO94811 219 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 FAM234AQ9H0X4 552 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 CDIPTO14735 213 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 RNF144BQ7Z419 303 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 SATL1Q86VE3 508 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 RAB1CQ92928 201 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 DVL3Q92997 716 aaPredicted RBP11.11□□□□□ -0.63
USP44-202ENST00000393091 ETV7Q9Y603 341 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 PKDREJQ9NTG1 2253 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 CR1P17927 2039 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 PPIAL4EA0A075B759 164 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 TRAV38-1A0A0B4J264 116 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 FAM230AA0A1W2PPH8 454 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 PPIAL4DF5H284 164 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 GPR37O15354 613 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 SYNGR1O43759 233 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 HCKP08631 526 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 PPIAL4FP0DN26 164 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 EGR1P18146 543 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 ANGPTL6Q8NI99 470 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 FAM168AQ92567 244 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 CHCHD6Q9BRQ6 235 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 METTL9Q9H1A3 318 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 RCC2Q9P258 522 aaKnown RBP11.11□□□□□ -0.63
USP44-202ENST00000393091 PPIAL4AQ9Y536 164 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 A3GALT2U3KPV4 340 aa11.11□□□□□ -0.63
USP44-202ENST00000393091 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
USP44-202ENST00000393091 A6NIN4 97 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 NDUFS7O75251 213 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 RHBDL1O75783 438 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 IRF2P14316 349 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 HTR2CP28335 458 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 NPY4RP50391 375 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 SMIM21Q3B7S5 101 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 HAGHLQ6PII5 290 aaPredicted RBP11.1□□□□□ -0.63
USP44-202ENST00000393091 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 CHST4Q8NCG5 386 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 OR4D6Q8NGJ1 314 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 LRRC29Q8WV35 223 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 ISOC1Q96CN7 298 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 TIMD4Q96H15 378 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 FAM192AQ9GZU8 254 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 TMEM165Q9HC07 324 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 ABRACLQ9P1F3 81 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 PPIAL4CA0A0B4J2A2 164 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 CYB5AP00167 134 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 FAM189A2Q15884 450 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 MPV17LQ2QL34 196 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 ZNF788Q6ZQV5 615 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 GAPTQ8N292 157 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 C8orf46Q8TAG6 207 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.1□□□□□ -0.63
USP44-202ENST00000393091 WIPI2Q9Y4P8 454 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 CSN2P05814 226 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 GRPP07492 148 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 OR3A4PP47883 348 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 ZMYND11Q15326 602 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 CLEC12BQ2HXU8 276 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 Q6P435 159 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 ZNF561Q8N587 486 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 OR51F2Q8NH61 342 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 ACOT12Q8WYK0 555 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 DACT3Q96B18 629 aaPredicted RBP11.1□□□□□ -0.63
USP44-202ENST00000393091 ORAI1Q96D31 301 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 SMURF1Q9HCE7 757 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 MIOXQ9UGB7 285 aa11.1□□□□□ -0.63
USP44-202ENST00000393091 MRPS28Q9Y2Q9 187 aaKnown RBP11.1□□□□□ -0.63
USP44-202ENST00000393091 H3BMQ9 156 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 SDC2P34741 201 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 SFXN4Q6P4A7 337 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 ZNF841Q6ZN19 808 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 C1QL2Q7Z5L3 287 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 SPICQ8N5J4 248 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 ZNF525Q8N782 197 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 DYNC2LI1Q8TCX1 351 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 Q96M66 194 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 TREM2Q9NZC2 230 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 NLKQ9UBE8 527 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 CACNG2Q9Y698 323 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 ABCA4P78363 2273 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 TRAPPC2LH3BP13 241 aa11.09□□□□□ -0.63
USP44-202ENST00000393091 MAS1P04201 325 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms