RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 ZNF488Q96MN9 340 aa12.49□□□□□ -0.41
SUMO1-203ENST00000392246 NRIP2Q9BQI9 281 aa12.49□□□□□ -0.41
SUMO1-203ENST00000392246 TMEM246Q9BRR3 403 aa12.49□□□□□ -0.41
SUMO1-203ENST00000392246 TMUB1Q9BVT8 246 aa12.49□□□□□ -0.41
SUMO1-203ENST00000392246 SNTG1Q9NSN8 517 aa12.49□□□□□ -0.41
SUMO1-203ENST00000392246 SSR3Q9UNL2 185 aa12.49□□□□□ -0.41
SUMO1-203ENST00000392246 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 IGHV3OR15-7A0A075B7D8 119 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 TRAPPC2LH3BP13 241 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 NXPH2O95156 264 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 CD99P14209 185 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 CPT2P23786 658 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 FGF9P31371 208 aaPredicted RBP12.48□□□□□ -0.41
SUMO1-203ENST00000392246 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 LMO4P61968 165 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 SMIM21Q3B7S5 101 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 ACP7Q6ZNF0 438 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 DCDC5Q6ZRR9 648 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 LRRTM1Q86UE6 522 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 FAM90A1Q86YD7 464 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 JAGN1Q8N5M9 183 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 PXT1Q8NFP0 134 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 C18orf12Q96KH6 178 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 HES4Q9HCC6 221 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 SMURF1Q9HCE7 757 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 EXOSC4Q9NPD3 245 aaKnown RBP12.48□□□□□ -0.41
SUMO1-203ENST00000392246 NLKQ9UBE8 527 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 MIOXQ9UGB7 285 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 GSTK1Q9Y2Q3 226 aa12.48□□□□□ -0.41
SUMO1-203ENST00000392246 CEACAM18A8MTB9 384 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 ANGPTL7O43827 346 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 IGHV2-5P01817 119 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 GYPAP02724 150 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 PTGFRP43088 359 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 GLT8D1Q68CQ7 371 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 C22orf42Q6IC83 251 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 TNFAIP8L1Q8WVP5 186 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 FOXRED1Q96CU9 486 aaPredicted RBP12.47□□□□□ -0.41
SUMO1-203ENST00000392246 SEH1LQ96EE3 360 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 UQCC2Q9BRT2 126 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 FAM192AQ9GZU8 254 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 OR51E2Q9H255 320 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 ZNF665Q9H7R5 613 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 PATZ1Q9HBE1 687 aaKnown RBP12.47□□□□□ -0.41
SUMO1-203ENST00000392246 RHOFQ9HBH0 211 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 TXNL4BQ9NX01 149 aaKnown RBP12.47□□□□□ -0.41
SUMO1-203ENST00000392246 MAST4O15021 2626 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 IGKV1-12A0A0C4DH73 117 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 OR2AT4A6NND4 320 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 TNFRSF13BO14836 293 aaPredicted RBP12.47□□□□□ -0.41
SUMO1-203ENST00000392246 KDM4BO94953 1096 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 IGKV1D-12P01611 117 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 FOSL1P15407 271 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 ADRA2CP18825 462 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 BCL3P20749 454 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 GADD45AP24522 165 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 MYL9P24844 172 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 IL2RGP31785 369 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 OR3A4PP47883 348 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 NPBWR2P48146 333 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 TIMM50Q3ZCQ8 353 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 STUMQ69YW2 141 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 BATF2Q8N1L9 274 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 OR5T2Q8NGG2 359 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 YIPF6Q96EC8 236 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 S100A13Q99584 98 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 NKX3-1Q99801 234 aaPredicted RBP12.47□□□□□ -0.41
SUMO1-203ENST00000392246 CNTD2Q9H8S5 307 aa12.47□□□□□ -0.41
SUMO1-203ENST00000392246 FLNAP21333 2647 aaKnown RBP12.46□□□□□ -0.41
SUMO1-203ENST00000392246 F5H0A9 414 aaPredicted RBP12.46□□□□□ -0.42
SUMO1-203ENST00000392246 F8VVB4 439 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 F8VWA3 439 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 INHBBP09529 407 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 WNT2P09544 360 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 PSG2P11465 335 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 RPS2P15880 293 aaKnown RBP12.46□□□□□ -0.42
SUMO1-203ENST00000392246 PSMD7P51665 324 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 ATPAF1Q5TC12 328 aaPredicted RBP12.46□□□□□ -0.42
SUMO1-203ENST00000392246 ASCL4Q6XD76 172 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 GDPGP1Q6ZNW5 385 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 NLRC3Q7RTR2 1065 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 C1QL2Q7Z5L3 287 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 LYPD6Q86Y78 171 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 FAM58AQ8N1B3 248 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 OR13F1Q8NGS4 319 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 ANGPTL6Q8NI99 470 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 EMG1Q92979 244 aaKnown RBP12.46□□□□□ -0.42
SUMO1-203ENST00000392246 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.42
SUMO1-203ENST00000392246 CHCHD6Q9BRQ6 235 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 DNTTIP1Q9H147 329 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 ELL3Q9HB65 397 aaPredicted RBP12.46□□□□□ -0.42
SUMO1-203ENST00000392246 RBFOX1Q9NWB1 397 aaKnown RBP12.46□□□□□ -0.42
SUMO1-203ENST00000392246 KAAG1Q9UBP8 84 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 ING4Q9UNL4 249 aa12.46□□□□□ -0.42
SUMO1-203ENST00000392246 CELSR1Q9NYQ6 3014 aa12.45□□□□□ -0.42
SUMO1-203ENST00000392246 LOC100506127A0A0U1RQW1 187 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms