RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 J3QLI3 93 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 K7EM74 188 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 SULT1C2O00338 296 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 KPNA3O00505 521 aaPredicted RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 AZIN1O14977 448 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ARPC5O15511 151 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 PSTPIP1O43586 416 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 UGT1A9O60656 530 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 HPGDSO60760 199 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CCNKO75909 580 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 C1orf105O95561 183 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CD160O95971 181 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OXTP01178 125 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 IFNA21P01568 189 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 APOC1P02654 83 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 PPBPP02775 128 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ISG15P05161 165 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CALB1P05937 261 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TACSTD2P09758 323 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 C8orf88P0DMB2 117 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 GTF2F2P13984 249 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 UCHL3P15374 230 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 HIST1H1CP16403 213 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 WARSP23381 471 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 HMGB2P26583 209 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ELK4P28324 431 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 GNRHRP30968 328 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 SSTR5P35346 364 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OPRD1P41143 372 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 RBM34P42696 430 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 MAGEA12P43365 314 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 HCAR3P49019 387 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 DNASE1L1P49184 302 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TMED10P49755 219 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CRYBA4P53673 196 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CLDN6P56747 220 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR4D2P58180 307 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR10A3P58181 314 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TFAMQ00059 246 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 HMGCS1Q01581 520 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ACVR1Q04771 509 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 RAB31Q13636 194 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 APOFQ13790 326 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 DGUOKQ16854 277 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ATP6V1FQ16864 119 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 PGGHGQ32M88 737 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ACSM3Q53FZ2 586 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 PDZD11Q5EBL8 140 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 DMRTC1Q5HYR2 192 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 SPIN3Q5JUX0 258 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 PPM1LQ5SGD2 360 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TPRG1LQ5T0D9 272 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 DHRS4L2Q6PKH6 230 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 C4orf22Q6V702 233 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CYHR1Q6ZMK1 362 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 SSX6Q7RTT6 188 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ASCL5Q7RTU5 278 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TMED4Q7Z7H5 227 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 HORMAD1Q86X24 394 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 DHFR2Q86XF0 187 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 SLC35F2Q8IXU6 374 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 LGI3Q8N145 548 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OSR2Q8N2R0 312 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 KIF2BQ8N4N8 673 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 MS4A15Q8N5U1 240 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR10W1Q8NGF6 305 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR5L1Q8NGL2 311 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR6K2Q8NGY2 324 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR51A7Q8NH64 312 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR2AE1Q8NHA4 323 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 LHFPL5Q8TAF8 219 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 RASSF5Q8WWW0 418 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR5P2Q8WZ92 322 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 UBE2E3Q969T4 207 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TMBIM1Q969X1 311 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TLCD1Q96CP7 247 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 DNAJC19Q96DA6 116 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TCEAL4Q96EI5 215 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 CENPNQ96H22 339 aaPredicted RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ANKRD36BP1Q96IX9 119 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ITCHQ96J02 903 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TMEM56Q96MV1 263 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 SERPINB12Q96P63 405 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OLFM3Q96PB7 478 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR2V2Q96R30 315 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 OR2A5Q96R48 311 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TSNAXQ99598 290 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ATP5SQ99766 215 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 NIPSNAP3BQ9BS92 247 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ZNF717Q9BY31 904 aaPredicted RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 MRPS26Q9BYN8 205 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ZYG11BQ9C0D3 744 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 TLNRD1Q9H1K6 362 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 PPA2Q9H2U2 334 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 BOLA2Q9H3K6 86 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 MFSD1Q9H3U5 465 aa1.39□□□□□ -2.19
TRAV40-201ENST00000390467 ZSCAN16Q9H4T2 348 aaPredicted RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 DHX35Q9H5Z1 703 aaKnown RBP1.39□□□□□ -2.19
TRAV40-201ENST00000390467 UGT1A7Q9HAW7 530 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms