RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ZNF436Q9C0F3 470 aaPredicted RBP8.72□□□□□ -1.01
LTN1-203ENST00000389195 TMEM165Q9HC07 324 aa8.72□□□□□ -1.01
LTN1-203ENST00000389195 MSL2Q9HCI7 577 aa8.72□□□□□ -1.01
LTN1-203ENST00000389195 PIPOXQ9P0Z9 390 aa8.72□□□□□ -1.01
LTN1-203ENST00000389195 COPZ2Q9P299 210 aa8.72□□□□□ -1.01
LTN1-203ENST00000389195 PAIP2BQ9ULR5 123 aaKnown RBP8.72□□□□□ -1.01
LTN1-203ENST00000389195 ZFHX3Q15911 3703 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 CREBL2O60519 120 aaPredicted RBP8.71□□□□□ -1.01
LTN1-203ENST00000389195 HLA-AP01891 365 aaKnown RBP8.71□□□□□ -1.01
LTN1-203ENST00000389195 IFNA6P05013 189 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 NUBP1P53384 320 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 UBE2NP61088 152 aaKnown RBP8.71□□□□□ -1.01
LTN1-203ENST00000389195 ATXN7L3Q14CW9 347 aaPredicted RBP8.71□□□□□ -1.01
LTN1-203ENST00000389195 SLC9A3R2Q15599 337 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 ZNF826PQ6ZT77 177 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 TMEM229BQ8NBD8 167 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 OR56B1Q8NGI3 324 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 ZNF431Q8TF32 576 aaPredicted RBP8.71□□□□□ -1.01
LTN1-203ENST00000389195 ST8SIA4Q92187 359 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 GTF3AQ92664 365 aaKnown RBP8.71□□□□□ -1.01
LTN1-203ENST00000389195 STARD4Q96DR4 205 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 URM1Q9BTM9 101 aaKnown RBP8.71□□□□□ -1.01
LTN1-203ENST00000389195 NPDC1Q9NQX5 325 aaPredicted RBP8.71□□□□□ -1.01
LTN1-203ENST00000389195 FAM215AQ9Y5M1 114 aa8.71□□□□□ -1.01
LTN1-203ENST00000389195 CEACAM4O75871 244 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 GRPP07492 148 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 FAUP35544 74 aaKnown RBP8.71□□□□□ -1.02
LTN1-203ENST00000389195 CEBPDP49716 269 aaPredicted RBP8.71□□□□□ -1.02
LTN1-203ENST00000389195 DHRS2Q13268 280 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 CDK10Q15131 360 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 GABRA6Q16445 453 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 BEX5Q5H9J7 111 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 TMEM42Q69YG0 159 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 RAB12Q6IQ22 244 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 RPUSD3Q6P087 351 aaKnown RBP8.71□□□□□ -1.02
LTN1-203ENST00000389195 TCTE3Q8IZS6 198 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 Q96M66 194 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 C7orf50Q9BRJ6 194 aaKnown RBP8.71□□□□□ -1.02
LTN1-203ENST00000389195 METTL9Q9H1A3 318 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 EHFQ9NZC4 300 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 SLC7A11Q9UPY5 501 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 RAXQ9Y2V3 346 aa8.71□□□□□ -1.02
LTN1-203ENST00000389195 CHD3Q12873 2000 aaKnown RBP8.71□□□□□ -1.02
LTN1-203ENST00000389195 FIGNL2A6NMB9 653 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 WDR1O75083 606 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 C1QBP02746 253 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 ANXA3P12429 323 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 ZNF14P17017 642 aaPredicted RBP8.7□□□□□ -1.02
LTN1-203ENST00000389195 DNASE1P24855 282 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 FXYD4P59646 89 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 FAM27E3Q08E93 113 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 LGALSLQ3ZCW2 172 aaPredicted RBP8.7□□□□□ -1.02
LTN1-203ENST00000389195 ZNF626Q68DY1 528 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 OR1J1Q8NGS3 322 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 SLC25A40Q8TBP6 338 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 RDH5Q92781 318 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 APOBEC3DQ96AK3 386 aaPredicted RBP8.7□□□□□ -1.02
LTN1-203ENST00000389195 UFSP2Q9NUQ7 469 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 TAS2R8Q9NYW2 309 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 TREM2Q9NZC2 230 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 KCNN3Q9UGI6 736 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 CELSR1Q9NYQ6 3014 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 A0A1B0GUH1 482 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 NAP1L6A6NFF2 107 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 OR5H14A6NHG9 310 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 TEX46H3BTG2 121 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 SS18L1O75177 396 aaPredicted RBP8.7□□□□□ -1.02
LTN1-203ENST00000389195 MELTFP08582 738 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 HOXD11P31277 338 aaPredicted RBP8.7□□□□□ -1.02
LTN1-203ENST00000389195 MALLQ13021 153 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 METTL11BQ5VVY1 283 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 CD276Q5ZPR3 534 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 WDR86Q86TI4 376 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 TMEM17Q86X19 198 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 C9orf62Q8N4C0 152 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 FAM89BQ8N5H3 189 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 OR13G1Q8NGZ3 307 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 PTX4Q96A99 478 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 SARAFQ96BY9 339 aa8.7□□□□□ -1.02
LTN1-203ENST00000389195 MEIKINA0A087WXM9 373 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 FOXI3A8MTJ6 420 aaPredicted RBP8.69□□□□□ -1.02
LTN1-203ENST00000389195 AQP7O14520 342 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 CDIPTO14735 213 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 SLC22A5O76082 557 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 CHRM2P08172 466 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 NFYAP23511 347 aaPredicted RBP8.69□□□□□ -1.02
LTN1-203ENST00000389195 ARR3P36575 388 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 ZNF81P51508 661 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 ZNF83P51522 516 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 ATP1B3P54709 279 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 PSG7Q13046 419 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 CNN3Q15417 329 aaKnown RBP8.69□□□□□ -1.02
LTN1-203ENST00000389195 SPRNQ5BIV9 151 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 FAM53AQ6NSI3 398 aaPredicted RBP8.69□□□□□ -1.02
LTN1-203ENST00000389195 TMEM53Q6P2H8 277 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
LTN1-203ENST00000389195 Q6ZS92 163 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 Q6ZT83 130 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 LRP11Q86VZ4 500 aa8.69□□□□□ -1.02
LTN1-203ENST00000389195 OSR2Q8N2R0 312 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms