RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 HLA-DPA1P20036 260 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 USF1P22415 310 aaPredicted RBP-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 GLRA2P23416 452 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 CXCR1P25024 350 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 ZNF773Q6PK81 442 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 SDR9C7Q8NEX9 313 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 ERMNQ8TAM6 284 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 NUBPLQ8TB37 319 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 PECRQ9BY49 303 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 NT5MQ9NPB1 228 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 TAC3Q9UHF0 121 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 LINC00588Q9Y4M8 146 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 U3KQV3 271 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 SLX4Q8IY92 1834 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 GLI3P10071 1580 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 JCADQ9P266 1359 aa-1.59□□□□□ -2.66
SNORA40-201ENST00000388090 ZNF532Q9HCE3 1301 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 SLC22A20A6NK97 555 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 E7EWF7 191 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 GABRPO00591 440 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 ZW10O43264 779 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 ZNF737O75373 536 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 CRPP02741 224 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 UGT2B4P06133 528 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 CSNK2A2P19784 350 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 PBLDP30039 288 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 PPICP45877 212 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 KDSRQ06136 332 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 SLC38A11Q08AI6 406 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 ADIGQ0VDE8 80 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 SCGB2A2Q13296 93 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 HTR4Q13639 388 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 TPTE2P1Q5T6R2 138 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 REEP3Q6NUK4 255 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 AGTRAPQ6RW13 159 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 H2BFWTQ7Z2G1 175 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 DYNAPQ8N1N2 210 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 ZFAND2AQ8N6M9 145 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 C2orf15Q8WU43 125 aaKnown RBP-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 ASB17Q8WXJ9 295 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 SENP8Q96LD8 212 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 RPRD1AQ96P16 312 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 FAM111AQ96PZ2 611 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 ATP5SQ99766 215 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 ZNF471Q9BX82 626 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 REG4Q9BYZ8 158 aa-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 ZNF638Q14966 1978 aaKnown RBP-1.6□□□□□ -2.67
SNORA40-201ENST00000388090 GRIN2BQ13224 1484 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 IGHV3-15A0A0B4J1V0 119 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 HPRT1P00492 218 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 OR4Q2P0C623 313 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 GTF2F2P13984 249 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 ATP6V1C1P21283 382 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 FOXN2P32314 431 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 RWDD2BP57060 319 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 OR2B6P58173 313 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 SKP2Q13309 424 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 TGFBIQ15582 683 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 HADHQ16836 314 aaKnown RBP-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 PPM1LQ5SGD2 360 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 LRRC28Q86X40 367 aaPredicted RBP-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 OR8B12Q8NGG6 310 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 LHFPL5Q8TAF8 219 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 NDNFQ8TB73 568 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 HIST1H2BAQ96A08 127 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 SGTBQ96EQ0 304 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 SMARCD1Q96GM5 515 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 CHST5Q9GZS9 411 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 ARGLU1Q9NWB6 273 aaPredicted RBP-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 HRASLS2Q9NWW9 162 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 NINJ2Q9NZG7 142 aa-1.61□□□□□ -2.67
SNORA40-201ENST00000388090 ASXL3Q9C0F0 2248 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 MED12Q93074 2177 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 DHRS12A0PJE2 317 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 CLDN11O75508 207 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 ERCC1P07992 297 aaPredicted RBP-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 SOD3P08294 240 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 HLA-GP17693 338 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 ARF4P18085 180 aaPredicted RBP-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 CRABP1P29762 137 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 HCCSP53701 268 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 ZNF117Q03924 483 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 INCA1Q0VD86 236 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 ZMYND11Q15326 602 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 VPS26BQ4G0F5 336 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 RIPPLY2Q5TAB7 128 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 ANGPTL8Q6UXH0 198 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 PRNTQ86SH4 94 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 OR1L4Q8NGR5 311 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 MAL2Q969L2 176 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 CCDC126Q96EE4 140 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 FAM19A4Q96LR4 140 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 TAPBPLQ9BX59 468 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 TM6SF2Q9BZW4 377 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 C8orf4Q9NR00 106 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 PXMP2Q9NR77 195 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 ENPP4Q9Y6X5 453 aa-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 ZNF608Q9ULD9 1512 aaPredicted RBP-1.62□□□□□ -2.67
SNORA40-201ENST00000388090 TMEM131Q92545 1883 aa-1.63□□□□□ -2.67
SNORA40-201ENST00000388090 TRAV26-1A0A087WT03 109 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms