RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 SCGB3A2Q96PL1 93 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 ARRDC1-AS1Q9H2J1 176 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 DNAJB11Q9UBS4 358 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 AMDHD2Q9Y303 409 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 SHANK1Q9Y566 2161 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 ADAMTS20P59510 1910 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 A0A1B0GV50 99 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 NUDT19A8MXV4 375 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 XRCC2O43543 280 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 EIF3GO75821 320 aaKnown RBP eCLIP14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 DIRAS3O95661 229 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 IGHV3-9P01782 118 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 ECH1Q13011 328 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 FAM76BQ5HYJ3 339 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 WDR5BQ86VZ2 330 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 SULF2Q8IWU5 870 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 OR2AE1Q8NHA4 323 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 OR14L1PQ8NHC6 308 aa14.18□□□□□ -0.14
NKX3-1-201ENST00000380871 ETV2O00321 342 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 TLX3O43711 291 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 NAT2P11245 290 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 CPT2P23786 658 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 MEOX2P50222 304 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 HIST3H3Q16695 136 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 SNAI3Q3KNW1 292 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 FNDC9Q8TBE3 224 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 REEP6Q96HR9 211 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 NAA11Q9BSU3 229 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 FAAP24Q9BTP7 215 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 PLEKHJ1Q9NW61 149 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 FRYQ5TBA9 3013 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 FIGNL2A6NMB9 653 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 SPRY1O43609 319 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 DEDDO75618 318 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 CER1O95813 267 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 TMEM225BP0DP42 221 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 PRF1P14222 555 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 CBX5P45973 191 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 DUSP3P51452 185 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 RBMS3Q6XE24 437 aaKnown RBP14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 DMBX1Q8NFW5 382 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 IMMP1LQ96LU5 166 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 GPR173Q9NS66 373 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 C1orf123Q9NWV4 160 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 EP300Q09472 2414 aaPredicted RBP14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 MTRF1O75570 445 aaKnown RBP14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 SLC35A1P78382 337 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 TAF9Q16594 264 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 OR2Y1Q8NGV0 311 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 S100A13Q99584 98 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 CACFD1Q9UGQ2 172 aa14.17□□□□□ -0.14
NKX3-1-201ENST00000380871 A0A0J9YW62 118 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 CST4P01036 141 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 HEXAP06865 529 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 HGFACQ04756 655 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 IP6K3Q96PC2 410 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 PRRX2Q99811 253 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 A0A1W2PPE3 182 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 ACAA1P09110 424 aaPredicted RBP14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 NOVA1P51513 510 aaKnown RBP14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 FXYD4P59646 89 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 GRB2P62993 217 aaKnown RBP14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 ENDOGQ14249 297 aaKnown RBP14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 SLC25A53Q5H9E4 307 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 RNF138Q8WVD3 245 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 RPS10P5Q9NQ39 176 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 PLEK2Q9NYT0 353 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 NXT1Q9UKK6 140 aaKnown RBP14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 DHRS3O75911 302 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 ADH6P28332 368 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 EIF1P41567 113 aaKnown RBP14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 ASCL1P50553 236 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 B2MP61769 119 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 SRYQ05066 204 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 ZNF616Q08AN1 781 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 PDCD1Q15116 288 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 MIDNQ504T8 468 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 MARS2Q96GW9 593 aaKnown RBP14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 PIGQQ9BRB3 760 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 SH3BGRL3Q9H299 93 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 WFDC1Q9HC57 220 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 PADI1Q9ULC6 663 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 MEMO1Q9Y316 297 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 TTC28Q96AY4 2481 aa14.16□□□□□ -0.14
NKX3-1-201ENST00000380871 AQP7P3A6NL99 342 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 ZIC3O60481 467 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 RFPL3SP0C7P2 107 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 ACKR3P25106 362 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 THBS4P35443 961 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 PIGPP57054 158 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 WIPI1Q5MNZ9 446 aaPredicted RBP14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 C9orf135Q5VTT2 229 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 RPUSD3Q6P087 351 aaKnown RBP14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 BATF2Q8N1L9 274 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 SERPINE3A8MV23 424 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 MBPP02686 304 aaPredicted RBP14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 SNRNP70P08621 437 aaKnown RBP14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 LIFP15018 202 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 ZXDAP98168 799 aa14.15□□□□□ -0.14
NKX3-1-201ENST00000380871 PHLDA2Q53GA4 152 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms