RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 MRPL49Q13405 166 aaKnown RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 AKR7LQ8NHP1 331 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 RTN4RQ9BZR6 473 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 WDR13Q9H1Z4 485 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 TP53BP1Q12888 1972 aaPredicted RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 IGKV1D-43A0A0B4J1Z2 117 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 FAM24AA6NFZ4 105 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 MSGN1A6NI15 193 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 CD74P04233 296 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 SRP14P37108 136 aaKnown RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 TLE4Q04727 773 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 ECH1Q13011 328 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 UNC119Q13432 240 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 YRDCQ86U90 279 aaKnown RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 RTN4RL2Q86UN3 420 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 THOC3Q96J01 351 aaKnown RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 PCED1AQ9H1Q7 454 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 TUSC2O75896 110 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 DXOO77932 396 aaKnown RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 B4GALT1P15291 398 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 AAED1Q7RTV5 226 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 CADM4Q8NFZ8 388 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 LIPT2A6NK58 231 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 GJE1A6NN92 205 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 ACTL6AO96019 429 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 PATE4P0C8F1 98 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 IRF2P14316 349 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 IDH3GP51553 393 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-202ENST00000379826 ANKRD37Q7Z713 158 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF709Q8N972 641 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 ST3GAL6Q9Y274 331 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 SERPINE3A8MV23 424 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 H3BP45 60 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 CRYABP02511 175 aaKnown RBP10.03□□□□□ -0.8
SMAD9-202ENST00000379826 PNLIPP16233 465 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 LPAR5Q9H1C0 372 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 HEATR5BQ9P2D3 2071 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 CENPFP49454 3210 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 A0A1W2PQD3 144 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 LILRA5A6NI73 299 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 MS4A18H0YCH9 400 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 NRASP01111 189 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 PLAURQ03405 335 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF239Q16600 458 aaKnown RBP10.03□□□□□ -0.8
SMAD9-202ENST00000379826 MS4A18Q3C1V0 323 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 C17orf78Q8N4C9 275 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF107Q9UII5 783 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-202ENST00000379826 STRAPQ9Y3F4 350 aaKnown RBP10.03□□□□□ -0.8
SMAD9-202ENST00000379826 C7orf77A4D0Y5 90 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 NPIPB9F8W1W9 429 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 G3V3Q6 166 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 TRAPPC2LH3BP13 241 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 CARD18P57730 90 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 ROM1Q03395 351 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 CLEC12BQ2HXU8 276 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 AADACL3Q5VUY0 350 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 DEGS2Q6QHC5 323 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 LCN15Q6UWW0 184 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 MAML2Q8IZL2 1156 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-202ENST00000379826 ADIPOR1Q96A54 375 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 SLC26A1Q9H2B4 701 aa10.03□□□□□ -0.8
SMAD9-202ENST00000379826 BOKQ9UMX3 212 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-202ENST00000379826 IGHV3-64DA0A0J9YX35 117 aa10.02□□□□□ -0.8
SMAD9-202ENST00000379826 MSX1P28360 303 aa10.02□□□□□ -0.8
SMAD9-202ENST00000379826 THBS4P35443 961 aa10.02□□□□□ -0.8
SMAD9-202ENST00000379826 PLP2Q04941 152 aa10.02□□□□□ -0.8
SMAD9-202ENST00000379826 VWCEQ96DN2 955 aa10.02□□□□□ -0.8
SMAD9-202ENST00000379826 OCSTAMPQ9BR26 566 aa10.02□□□□□ -0.8
SMAD9-202ENST00000379826 BCO1Q9HAY6 547 aa10.02□□□□□ -0.8
SMAD9-202ENST00000379826 C1QL1O75973 258 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 HKR1P10072 659 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 IAPPP10997 89 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 TESK1Q15569 626 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 ADIRFQ15847 76 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 MUCL1Q96DR8 90 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 SOX7Q9BT81 388 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 FAM206AQ9NX38 181 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 ZNF106Q9H2Y7 1883 aaKnown RBP10.02□□□□□ -0.81
SMAD9-202ENST00000379826 LOC102725191A0A1B0GVB3 256 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 CDRT15L2A8MXV6 281 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 PATE3B3GLJ2 98 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 TSTD3H0UI37 97 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 SSR4P51571 173 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 TEX30Q5JUR7 227 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 LYZL2Q7Z4W2 148 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 PLK3Q9H4B4 646 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 DNAJB11Q9UBS4 358 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 EPOPA6NHQ4 379 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 FIGNL2A6NMB9 653 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 PPP1R2P9O14990 202 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 ZNHIT1O43257 154 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 DHRS3O75911 302 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 MST1P26927 711 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 EIF1P41567 113 aaKnown RBP10.02□□□□□ -0.81
SMAD9-202ENST00000379826 MECP2P51608 486 aaKnown RBP10.02□□□□□ -0.81
SMAD9-202ENST00000379826 SHBQ15464 509 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 LIPHQ8WWY8 451 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 NINJ1Q92982 152 aa10.02□□□□□ -0.81
SMAD9-202ENST00000379826 MVB12AQ96EY5 273 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms