RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ZFP64Q9NPA5 681 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 FAM206AQ9NX38 181 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 TRBV5-7A0A0A0MS05 114 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 NPSP0C0P6 89 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 MSR1P21757 451 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 CPT2P23786 658 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 PRSS3P35030 304 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF93P35789 620 aaPredicted RBP9.47□□□□□ -0.89
NEDD9-201ENST00000379433 OR3A4PP47883 348 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 ALKBH6Q3KRA9 238 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 OLFML2AQ68BL7 652 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 FAHD2BQ6P2I3 314 aaPredicted RBP9.47□□□□□ -0.89
NEDD9-201ENST00000379433 DTX1Q86Y01 620 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 CREB3L1Q96BA8 519 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 FAHD2AQ96GK7 314 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 GINS4Q9BRT9 223 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 SUCNR1Q9BXA5 334 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 C20orf85Q9H1P6 137 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 STRAPQ9Y3F4 350 aaKnown RBP9.47□□□□□ -0.89
NEDD9-201ENST00000379433 TNRC6BQ9UPQ9 1833 aaKnown RBP9.46□□□□□ -0.89
NEDD9-201ENST00000379433 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 FAM230AA0A1W2PPH8 454 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 SLC17A2O00624 439 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 TNFRSF6BO95407 300 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 HPP00738 406 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 IGHMP01871 453 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 SERPINA2P20848 420 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 THBS4P35443 961 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 CEACAM3P40198 252 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 RRAS2P62070 204 aaPredicted RBP9.46□□□□□ -0.89
NEDD9-201ENST00000379433 NHLH2Q02577 135 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 GCNT2Q8N0V5 402 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 OR5D14Q8NGL3 314 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 CORO2AQ92828 525 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 MARVELD1Q9BSK0 173 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 NOX3Q9HBY0 568 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 RDH8Q9NYR8 311 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 ING4Q9UNL4 249 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 PKDREJQ9NTG1 2253 aa9.46□□□□□ -0.89
NEDD9-201ENST00000379433 DLEU1O43261 78 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 ANGPTL7O43827 346 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 NEURL1O76050 574 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 WISP2O76076 250 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 AQP8O94778 261 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 ST3GAL2Q16842 350 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 PLA2G2CQ5R387 149 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 BOD1L2Q8IYS8 172 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 TMEM104Q8NE00 496 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 FGFBP3Q8TAT2 258 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 WDR89Q96FK6 387 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-201ENST00000379433 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-201ENST00000379433 RNF2Q99496 336 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 OR51J1Q9H342 316 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 PTTG3PQ9NZH4 202 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 A0A1W2PNV4 684 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 GABARAPH6UMI1 98 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 ABCD4O14678 606 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF205O95201 554 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 CRYGCP07315 174 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 HTR5AP47898 357 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 KCNJ3P48549 501 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF84P51523 738 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 SNAI3Q3KNW1 292 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 SLC25A47Q6Q0C1 308 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 GLIPR1L1Q6UWM5 242 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 TFAP2EQ6VUC0 442 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 Q6ZTK2 550 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 ZIC4Q8N9L1 334 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 OR4C16Q8NGL9 310 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 PIGLQ9Y2B2 252 aa9.46□□□□□ -0.9
NEDD9-201ENST00000379433 LINC00862A6NCI5 91 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 M0R135 149 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 UBCP0CG48 685 aaKnown RBP9.45□□□□□ -0.9
NEDD9-201ENST00000379433 CD79AP11912 226 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF32P17041 273 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 ADH6P28332 368 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 SRD5A2P31213 254 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 BLOC1S1P78537 153 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 KLF9Q13886 244 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-201ENST00000379433 CDNFQ49AH0 187 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 NKAPLQ5M9Q1 402 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 SLC16A14Q7RTX9 510 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 DUSP18Q8NEJ0 188 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 OR2M7Q8NG81 312 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 CPT1CQ8TCG5 803 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF799Q96GE5 643 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 C1QTNF6Q9BXI9 259 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 GPR173Q9NS66 373 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 SERPINE3A8MV23 424 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 MRPL33O75394 65 aaKnown RBP9.45□□□□□ -0.9
NEDD9-201ENST00000379433 GLSO94925 669 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-201ENST00000379433 HLA-HP01893 362 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 AMY2AP04746 511 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 RAB40ALP0C0E4 278 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 FTH1P19P0C7X4 201 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 FAM157BP0CG42 384 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 STOMP27105 288 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 SLC25A53Q5H9E4 307 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms