RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 TRGV5A0A0B4J1U4 118 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 NGFP01138 241 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 CD1EP15812 388 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 LIPNQ5VXI9 398 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 ZNF418Q8TF45 676 aaPredicted RBP11.93□□□□□ -0.5
HIPK3-202ENST00000379016 PPP1R1CQ8WVI7 109 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 VAMP5O95183 116 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 PF4P02776 101 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 DPPA3Q6W0C5 159 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 ALX4Q9H161 411 aaPredicted RBP11.93□□□□□ -0.5
HIPK3-202ENST00000379016 PITPNC1Q9UKF7 332 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 LOXL2Q9Y4K0 774 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 ARG1P05089 322 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
HIPK3-202ENST00000379016 AESQ08117 197 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 SLC25A43Q8WUT9 341 aaPredicted RBP11.93□□□□□ -0.5
HIPK3-202ENST00000379016 HGDQ93099 445 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 KLK15Q9H2R5 256 aa11.93□□□□□ -0.5
HIPK3-202ENST00000379016 IGSF23A1L1A6 192 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 ACAA1P09110 424 aaPredicted RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 LIMS3P0CW19 117 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 LIMS4P0CW20 117 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 LPAR6P43657 344 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 FAM78AQ5JUQ0 283 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 C7orf43Q8WVR3 580 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 MED30Q96HR3 178 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 C16orf70Q9BSU1 422 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 NPAP1Q9NZP6 1156 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 F11RQ9Y624 299 aaKnown RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 HIST1H1CP16403 213 aaKnown RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 SPINK2P20155 84 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 SLC37A1P57057 533 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 SIX1Q15475 284 aaPredicted RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 OR8G5Q8NG78 346 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 STARD4Q96DR4 205 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 S1PR5Q9H228 398 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 DNAJB12Q9NXW2 375 aaKnown RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 C1SP09871 688 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 SHBQ15464 509 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 IGFBP7Q16270 282 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 DUSP18Q8NEJ0 188 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 MED29Q9NX70 200 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 FZD2Q14332 565 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 SNAI3Q3KNW1 292 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 OR4B1Q8NGF8 309 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 ADTRPQ96IZ2 230 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 C12orf42Q96LP6 360 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 ALKBH3Q96Q83 286 aaPredicted RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 PSMG3Q9BT73 122 aaPredicted RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 RAB1CQ92928 201 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 WDR89Q96FK6 387 aaPredicted RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 NAA50Q9GZZ1 169 aaKnown RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 ZNF576Q9H609 170 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 PLEKHB1Q9UF11 243 aaPredicted RBP11.92□□□□□ -0.5
HIPK3-202ENST00000379016 ARHGAP23Q9P227 1491 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 A0A087X0M5 115 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 A0A1B0GX30 115 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 ICOSLGO75144 302 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 APCSP02743 223 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 GPX3P22352 226 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 PSG5Q15238 335 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 OR4D9Q8NGE8 314 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 ZFP30Q9Y2G7 519 aa11.92□□□□□ -0.5
HIPK3-202ENST00000379016 SEC16AO15027 2179 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 IGKV3-20P01619 116 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 RPS4Y1P22090 263 aaKnown RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 RPS27P42677 84 aaKnown RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 TOMM34Q15785 309 aaPredicted RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 TMEM38BQ9NVV0 291 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 TMEM215Q68D42 235 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 PTRH1Q86Y79 214 aaKnown RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 FAM24BQ8N5W8 94 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 OR13H1Q8NG92 308 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 PPRC1Q5VV67 1664 aaKnown RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 FCGR3AP08637 254 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 HIST1H1BP16401 226 aaKnown RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 PIANPQ8IYJ0 282 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 PERPQ96FX8 193 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 CHRNA10Q9GZZ6 450 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 SLAMF8Q9P0V8 285 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 RBFOX2O43251 390 aaKnown RBP eCLIP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 WNT1P04628 370 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 FTH1P19P0C7X4 201 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 DGCR2P98153 550 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 CGB2Q6NT52 195 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 RFLNAQ6ZTI6 216 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 OR4C45A6NMZ5 311 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 SLC35E2P0CK97 266 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 FCGR2BP31994 310 aaPredicted RBP11.91□□□□□ -0.5
HIPK3-202ENST00000379016 CD96P40200 585 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 TMEM108Q6UXF1 575 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 WDR88Q6ZMY6 472 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 C16orf82Q7Z2V1 217 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 OXGR1Q96P68 337 aa11.91□□□□□ -0.5
HIPK3-202ENST00000379016 TEAD3Q99594 435 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms