RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CDKN2AP42771 156 aaKnown RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 TMEM33P57088 247 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 OLIG2Q13516 323 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 MEX3DQ86XN8 651 aaKnown RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 LSM10Q969L4 123 aaKnown RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 CLDN23Q96B33 292 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 KLHDC7BQ96G42 594 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 C12orf42Q96LP6 360 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SPINT3P49223 89 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SKP2Q13309 424 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 C6orf132Q5T0Z8 1188 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 WDR92Q96MX6 357 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 PARLQ9H300 379 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 UBE2ZQ9H832 354 aaPredicted RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 LOC107986453A0A1B0GWG9 222 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 ZAR1LA6NP61 321 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 FRS3O43559 492 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 SRSF10O75494 262 aaKnown RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 ONECUT2O95948 504 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 CPMP14384 443 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 ZNF880Q6PDB4 577 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 RNF165Q6ZSG1 346 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 UMODL1-AS1Q8N2C9 162 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 MUC20Q8N307 709 aaPredicted RBP7.88□□□□□ -1.15
LIG3-202ENST00000378526 ST6GAL2Q96JF0 529 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 MEGF9Q9H1U4 602 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 ICAM5Q9UMF0 924 aa7.88□□□□□ -1.15
LIG3-202ENST00000378526 DPRXA6NFQ7 191 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 MPTX1A8MV57 137 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 ICAM2P13598 275 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 SUSD3Q96L08 255 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 MTCH2Q9Y6C9 303 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 TRDCB7Z8K6 153 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 SFT2D2O95562 160 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 AMY1AP04745 511 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 OPRK1P41145 380 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 TNFRSF9Q07011 255 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 SLC10A6Q3KNW5 377 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 C19orf54Q5BKX5 351 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 CXCL17Q6UXB2 119 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 DOK1Q99704 481 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 RAB1BQ9H0U4 201 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 ZNF275Q9NSD4 429 aaPredicted RBP7.87□□□□□ -1.15
LIG3-202ENST00000378526 DYNLT3P51808 116 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 RPS16P62249 146 aaKnown RBP7.87□□□□□ -1.15
LIG3-202ENST00000378526 ZNF562Q6V9R5 426 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 CTDSPLO15194 276 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 HKR1P10072 659 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 LDLRAD2Q5SZI1 272 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 CA13Q8N1Q1 262 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 FGF20Q9NP95 211 aaPredicted RBP7.87□□□□□ -1.15
LIG3-202ENST00000378526 AUP1Q9Y679 476 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 LAMB1P07942 1786 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 TRGC2P03986 189 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 ADRA2AP08913 450 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 SEC11BP0C7V7 166 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 CST5P28325 142 aaPredicted RBP7.87□□□□□ -1.15
LIG3-202ENST00000378526 GLCCI1Q86VQ1 547 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 CDCP1Q9H5V8 836 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 HS3ST2Q9Y278 367 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 ALKQ9UM73 1620 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 VWDEQ8N2E2 1590 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 GPR25O00155 361 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 TMEM50AO95807 157 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 ERGP11308 486 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 SNAI3Q3KNW1 292 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 FIGLAQ6QHK4 219 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 SCCPDHQ8NBX0 429 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 PELI1Q96FA3 418 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 FGFBP2Q9BYJ0 223 aa7.87□□□□□ -1.15
LIG3-202ENST00000378526 EFSO43281 561 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 FGF9P31371 208 aaPredicted RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 BTG2P78543 158 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 PRTGQ2VWP7 1150 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 PAPPA-AS1Q5QFB9 102 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 JMJD6Q6NYC1 403 aaPredicted RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 H1FXQ92522 213 aaKnown RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 SDCBPO00560 298 aaPredicted RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 RNF224P0DH78 156 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 SOX4Q06945 474 aaPredicted RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 MGAT2Q10469 447 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 FBXO46Q6PJ61 603 aaPredicted RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 LIAT1Q6ZQX7 453 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 Q8IYB0 196 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 NUBPLQ8TB37 319 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 SNRNP40Q96DI7 357 aaKnown RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 MRIQ9BWK5 157 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 AUNIPQ9H7T9 357 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 CHODLQ9H9P2 273 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 CMC2Q9NRP2 79 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 MTFP1Q9UDX5 166 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 RARRES3Q9UL19 164 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 R4GMQ9 66 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 MBLAC1A4D2B0 266 aaPredicted RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 EDDM3AQ14507 147 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 MICBQ29980 383 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 CGB2Q6NT52 195 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 GDF7Q7Z4P5 450 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ZNF687Q8N1G0 1237 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 P2RX4Q99571 388 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms