RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 PCDHGB1Q9Y5G3 927 aa12.64□□□□□ -0.39
RAB4B-202ENST00000378307 SNTNA6NMZ2 147 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 HOXA3O43365 443 aaPredicted RBP12.63□□□□□ -0.39
RAB4B-202ENST00000378307 NXPH2O95156 264 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
RAB4B-202ENST00000378307 LIMS3P0CW19 117 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 LIMS4P0CW20 117 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 CCR9P51686 369 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 FUT6P51993 359 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 IL24Q13007 206 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 KLRD1Q13241 179 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 ALKBH1Q13686 389 aaKnown RBP12.63□□□□□ -0.39
RAB4B-202ENST00000378307 PDCD1Q15116 288 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 RCN1Q15293 331 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 ZNF691Q5VV52 312 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 C12orf54Q6X4T0 127 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 CCDC54Q8NEL0 328 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 CNIH3Q8TBE1 160 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 TNFRSF14Q92956 283 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 SLAMF9Q96A28 289 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 C19orf12Q9NSK7 152 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 OR14J1Q9UGF5 321 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 SLC7A11Q9UPY5 501 aa12.63□□□□□ -0.39
RAB4B-202ENST00000378307 DSCAML1Q8TD84 2053 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 A0A0U1RQK1 487 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 RNASEK-C17orf49H0YIS7 233 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 FADS2O95864 444 aaKnown RBP12.62□□□□□ -0.39
RAB4B-202ENST00000378307 CFPP27918 469 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 GTF2A1P52655 376 aaPredicted RBP12.62□□□□□ -0.39
RAB4B-202ENST00000378307 BPIFB3P59826 476 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 ERVFRD-1P60508 538 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 ACTA2P62736 377 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 ACTG2P63267 376 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 ADARB1P78563 741 aaKnown RBP12.62□□□□□ -0.39
RAB4B-202ENST00000378307 RAB40BQ12829 278 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 SMIM21Q3B7S5 101 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 CRIP3Q6Q6R5 217 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 Q6YL49 198 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 SYS1Q8N2H4 156 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 PNKDQ8N490 385 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 ZNF555Q8NEP9 628 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 RDH12Q96NR8 316 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 TNFRSF19Q9NS68 423 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 IL36RNQ9UBH0 155 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 POLDIP2Q9Y2S7 368 aa12.62□□□□□ -0.39
RAB4B-202ENST00000378307 RPL36Q9Y3U8 105 aaKnown RBP12.62□□□□□ -0.39
RAB4B-202ENST00000378307 A0A1W2PRD5 423 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 A0A1W2PRF3 423 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 A0A1W2PRM7 423 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 CLDN34H7C241 214 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 GATBO75879 557 aaKnown RBP12.61□□□□□ -0.39
RAB4B-202ENST00000378307 MELTFP08582 738 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 HKR1P10072 659 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 ATF1P18846 271 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 NPBWR2P48146 333 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 AWAT1Q58HT5 328 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 XAF1Q6GPH4 301 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 SLC25A26Q70HW3 274 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 KIR3DL3Q8N743 410 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 CYGBQ8WWM9 190 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 PP6455Q8WZ26 134 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 C10orf35Q96D05 121 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 BORCS8Q96FH0 119 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 DMRTB1Q96MA1 342 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 SPACA5Q96QH8 159 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 PDCD1LG2Q9BQ51 273 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 FGF20Q9NP95 211 aaPredicted RBP12.61□□□□□ -0.39
RAB4B-202ENST00000378307 HHLA2Q9UM44 414 aa12.61□□□□□ -0.39
RAB4B-202ENST00000378307 A0A1W2PQ09 198 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 SPRY1O43609 319 aaPredicted RBP12.6□□□□□ -0.39
RAB4B-202ENST00000378307 ZFPL1O95159 310 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 SERPINA3P01011 423 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 CALCBP10092 127 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 AZGP1P25311 298 aaKnown RBP12.6□□□□□ -0.39
RAB4B-202ENST00000378307 ETV1P50549 477 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 CAPZA1P52907 286 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 COL10A1Q03692 680 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 KLHL22Q53GT1 634 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 LAIR2Q6ISS4 152 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 HCP5Q6MZN7 132 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 METAP1DQ6UB28 335 aaPredicted RBP12.6□□□□□ -0.39
RAB4B-202ENST00000378307 UTS2BQ765I0 119 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 ZNF561Q8N587 486 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 C11orf42Q8N5U0 333 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 ZNF676Q8N7Q3 588 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 OR4M1Q8NGD0 313 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 SLC25A28Q96A46 364 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 RFT1Q96AA3 541 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 CEP19Q96LK0 163 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 INPP5EQ9NRR6 644 aa12.6□□□□□ -0.39
RAB4B-202ENST00000378307 IGKV1-12A0A0C4DH73 117 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 M0R1W7 72 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 ZNF737O75373 536 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 KNG1P01042 644 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 IGKV1D-12P01611 117 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 TK1P04183 234 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 GNAO1P09471 354 aa12.59□□□□□ -0.39
RAB4B-202ENST00000378307 ZNF20P17024 532 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms