RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ALKBH2Q6NS38 261 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 ZNF529Q6P280 563 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 KLHL24Q6TFL4 600 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 ZNF813Q6ZN06 617 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 BPIFB2Q8N4F0 458 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 OR10H5Q8NGA6 315 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 COQ8AQ8NI60 647 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 S100PBPQ96BU1 408 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 FOXN4Q96NZ1 517 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 MFFQ9GZY8 342 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 KCNK15Q9H427 330 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 PLEKHF2Q9H8W4 249 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 C12orf4Q9NQ89 552 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 FAM206AQ9NX38 181 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 ELOVL5Q9NYP7 299 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 CGGBP1Q9UFW8 167 aaPredicted RBP10.72□□□□□ -0.69
VRK3-202ENST00000377011 FLVCR1Q9Y5Y0 555 aa10.72□□□□□ -0.69
VRK3-202ENST00000377011 F8P00451 2351 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 ZNF724A8MTY0 619 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 TRIM77I1YAP6 450 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 SIX6O95475 246 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 PLAUP00749 431 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 RNASE10Q5GAN6 216 aaKnown RBP10.71□□□□□ -0.69
VRK3-202ENST00000377011 LY6G6FQ5SQ64 297 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 THEM4Q5T1C6 240 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 SFRP5Q5T4F7 317 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 C9orf135Q5VTT2 229 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 ZNF660Q6AZW8 331 aaPredicted RBP10.71□□□□□ -0.69
VRK3-202ENST00000377011 LRFN4Q6PJG9 635 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 OR2W3Q7Z3T1 314 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 SLC25A42Q86VD7 318 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 STEAP2Q8NFT2 490 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 OR51A2Q8NGJ7 313 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 OR8S1Q8NH09 359 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 DVL3Q92997 716 aaPredicted RBP10.71□□□□□ -0.69
VRK3-202ENST00000377011 PPP1R14AQ96A00 147 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 PHYHIPLQ96FC7 376 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 ZC4H2Q9NQZ6 224 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 B3GAT1Q9P2W7 334 aa10.71□□□□□ -0.69
VRK3-202ENST00000377011 A0A1W2PR80 420 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 MEIS3P1A6NDR6 274 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 AQP7P3A6NL99 342 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 H3BSH0 61 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 RAB27BO00194 218 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 MPZL1O95297 269 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 HLA-DOBP13765 273 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 ATF4P18848 351 aaPredicted RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 FKBP2P26885 142 aaKnown RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 CD34P28906 385 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 SLC35A1P78382 337 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 QRFPP83859 136 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 POU3F1Q03052 451 aaPredicted RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 SPOCK1Q08629 439 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 DHRS2Q13268 280 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 ALKAL2Q6UX46 152 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 LYG2Q86SG7 212 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 STPG2Q8N412 459 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 KCNRGQ8N5I3 272 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 OR1M1Q8NGA1 313 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 OR13C8Q8NGS7 320 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 OR1S1Q8NH92 325 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 ST8SIA4Q92187 359 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 SLAMF6Q96DU3 332 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 WDR89Q96FK6 387 aaPredicted RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 CXorf58Q96LI9 332 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 MRPL13Q9BYD1 178 aaKnown RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 TINAGL1Q9GZM7 467 aaPredicted RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 CHST6Q9GZX3 395 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 ACANP16112 2415 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 RAI1Q7Z5J4 1906 aaPredicted RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 TRAV14DV4A0A0A6YYC5 116 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 TTRP02766 147 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 CHRM2P08172 466 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 RAB3AP20336 220 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 CRYGSP22914 178 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 LAP3P28838 519 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 UBE2MP61081 183 aaKnown RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 FMODQ06828 376 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 ACTBL2Q562R1 376 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 TSPO2Q5TGU0 170 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 BEND4Q6ZU67 534 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 PXT1Q8NFP0 134 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 OR9K2Q8NGE7 335 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 OR4D6Q8NGJ1 314 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 OR5D14Q8NGL3 314 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 C11orf40Q8WZ69 217 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 PIK3IP1Q96FE7 263 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 LRRC46Q96FV0 321 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 PBOV1Q9GZY1 135 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 GP6Q9HCN6 339 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 SLC7A10Q9NS82 523 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 COMMD9Q9P000 198 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 ANAPC10Q9UM13 185 aa10.7□□□□□ -0.7
VRK3-202ENST00000377011 NOSIPQ9Y314 301 aaKnown RBP10.7□□□□□ -0.7
VRK3-202ENST00000377011 M0QYG6 137 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 P2RY10O00398 339 aa10.69□□□□□ -0.7
VRK3-202ENST00000377011 TSPAN4O14817 238 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms