RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CEBPDP49716 269 aaPredicted RBP17.15■□□□□ 0.34
VSX1-201ENST00000376707 SLC35E4Q6ICL7 350 aa17.15■□□□□ 0.34
VSX1-201ENST00000376707 MKXQ8IYA7 352 aa17.15■□□□□ 0.34
VSX1-201ENST00000376707 C17orf50Q8WW18 174 aa17.15■□□□□ 0.34
VSX1-201ENST00000376707 HEXA-AS1Q9H8Q6 139 aa17.15■□□□□ 0.34
VSX1-201ENST00000376707 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.15■□□□□ 0.34
VSX1-201ENST00000376707 hCG_1809904A0A1W2PP81 198 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 A0A1W2PPE2 198 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 A0A1W2PQL4 384 aaPredicted RBP17.14■□□□□ 0.33
VSX1-201ENST00000376707 A0A1W2PR64 198 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 A0A1W2PRV1 198 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 SAC3D1A6NKF1 404 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 NOS1APO75052 506 aaPredicted RBP17.14■□□□□ 0.33
VSX1-201ENST00000376707 SULT1C4O75897 302 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 GABRA5P31644 462 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 TMEM200BQ69YZ2 307 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 CATSPERDQ86XM0 798 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 BATF2Q8N1L9 274 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 OR4M1Q8NGD0 313 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 PYDC1Q8WXC3 89 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 RORBQ92753 470 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 RFKQ969G6 155 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 EME1Q96AY2 570 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 NRIP2Q9BQI9 281 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 OR14J1Q9UGF5 321 aa17.14■□□□□ 0.33
VSX1-201ENST00000376707 A6NIN4 97 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 METTL15A6NJ78 407 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 TSPAN15O95858 294 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 ALPLP05186 524 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 CDC42P60953 191 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 LY6EQ16553 131 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 LRRC75BQ2VPJ9 315 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 YIPF7Q8N8F6 280 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 TRUB1Q8WWH5 349 aaKnown RBP17.13■□□□□ 0.33
VSX1-201ENST00000376707 TBX5Q99593 518 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 PLEKHA1Q9HB21 404 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 USE1Q9NZ43 259 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 FBLN5Q9UBX5 448 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 SLC22A13Q9Y226 551 aa17.13■□□□□ 0.33
VSX1-201ENST00000376707 H3BNX3 289 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 RPP14O95059 124 aaKnown RBP17.12■□□□□ 0.33
VSX1-201ENST00000376707 COX7A1P24310 79 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 MPZP25189 248 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 C2orf68Q2NKX9 166 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 ANGPTL5Q86XS5 388 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 OR10H4Q8NGA5 316 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 OR4C13Q8NGP0 309 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 TRMT10AQ8TBZ6 339 aaKnown RBP17.12■□□□□ 0.33
VSX1-201ENST00000376707 AJUBAQ96IF1 538 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 MEGF9Q9H1U4 602 aa17.12■□□□□ 0.33
VSX1-201ENST00000376707 E9PQ18 207 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 APOL3O95236 402 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 TK1P04183 234 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 CCL3L1P16619 93 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 LGALS4P56470 323 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 ERVFRD-1P60508 538 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 ISL1P61371 349 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 AANATQ16613 207 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 ODF4Q2M2E3 257 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 SLC25A30Q5SVS4 291 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 ZFP1Q6P2D0 407 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 CCDC54Q8NEL0 328 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 FAM110DQ8TAY7 271 aaPredicted RBP17.11■□□□□ 0.33
VSX1-201ENST00000376707 HRASLS5Q96KN8 279 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 HES4Q9HCC6 221 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 RAB18Q9NP72 206 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 SLC7A11Q9UPY5 501 aa17.11■□□□□ 0.33
VSX1-201ENST00000376707 FAM230AA0A1W2PPH8 454 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 PIPP12273 146 aaPredicted RBP17.1■□□□□ 0.33
VSX1-201ENST00000376707 PAX6P26367 422 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 ATP6V1E1P36543 226 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 BMXP51813 675 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 IL24Q13007 206 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 ZNF273Q14593 569 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 KPNB1Q14974 876 aaKnown RBP17.1■□□□□ 0.33
VSX1-201ENST00000376707 Q6ZTK2 550 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 CALHM1Q8IU99 346 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 C11orf42Q8N5U0 333 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 ASCC1Q8N9N2 400 aaKnown RBP17.1■□□□□ 0.33
VSX1-201ENST00000376707 PPP1R35Q8TAP8 253 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 PKIBQ9C010 78 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 SIGLEC9Q9Y336 463 aa17.1■□□□□ 0.33
VSX1-201ENST00000376707 WNK1Q9H4A3 2382 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 VWFP04275 2813 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 H3BSH0 61 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 EI24O14681 340 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 SYT7O43581 403 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 CSF1P09603 554 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 ERVK11-1P61568 191 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 ZNF85Q03923 595 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 ZNF782Q6ZMW2 699 aaPredicted RBP17.09■□□□□ 0.33
VSX1-201ENST00000376707 PRSS35Q8N3Z0 413 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 RNF166Q96A37 237 aaPredicted RBP17.09■□□□□ 0.33
VSX1-201ENST00000376707 ADI1Q9BV57 179 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 IMPAD1Q9NX62 359 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 ORC6Q9Y5N6 252 aa17.09■□□□□ 0.33
VSX1-201ENST00000376707 J3QRE1 110 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 KIR2DS4P43632 304 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 ALDH3A2P51648 485 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 SNRPGP62308 76 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms