RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ZNF581Q9P0T4 197 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 NXT1Q9UKK6 140 aaKnown RBP14.43□□□□□ -0.1
TRIM39-201ENST00000376656 KCNIP3Q9Y2W7 256 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 FOSL1P15407 271 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 FAHP16930 419 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 FXYD4P59646 89 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 PHLDA2Q53GA4 152 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 GFI1BQ5VTD9 330 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 SLC38A9Q8NBW4 561 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 LFNGQ8NES3 379 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 STT3BQ8TCJ2 826 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 RTN4IP1Q8WWV3 396 aaPredicted RBP14.43□□□□□ -0.1
TRIM39-201ENST00000376656 GALNT14Q96FL9 552 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 A0A1B0GW64 132 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 CDRT15L2A8MXV6 281 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 OPRM1P35372 400 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 TAGLN2P37802 199 aaKnown RBP14.43□□□□□ -0.1
TRIM39-201ENST00000376656 ALDH3B1P43353 468 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 MYBPHQ13203 477 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 SMAD4Q13485 552 aaKnown RBP14.43□□□□□ -0.1
TRIM39-201ENST00000376656 ELOBQ15370 118 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 PDZD11Q5EBL8 140 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 C1orf189Q5VU69 101 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 FBXW12Q6X9E4 464 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 UEVLDQ8IX04 471 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 LRRC18Q8N456 261 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 ZNF610Q8N9Z0 462 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 PGAM5Q96HS1 289 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 PIGQQ9BRB3 760 aa14.43□□□□□ -0.1
TRIM39-201ENST00000376656 SPTBN5Q9NRC6 3674 aaKnown RBP14.43□□□□□ -0.1
TRIM39-201ENST00000376656 NCOA6Q14686 2063 aaPredicted RBP14.42□□□□□ -0.1
TRIM39-201ENST00000376656 MED12Q93074 2177 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 VSTM2BA6NLU5 285 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 H0YL77 283 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 LINC01565O15544 149 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 IGHG1P01857 330 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 HIKESHIQ53FT3 197 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 VN1R1Q9GZP7 353 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 NELFAQ9H3P2 528 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 A0A1W2PNV4 684 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 RBFOX3A6NFN3 312 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 TLCD2A6NGC4 264 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 H3BMH7 237 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 RNF224P0DH78 156 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 ZNF728P0DKX0 622 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 FOSL2P15408 326 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 CSNK1A1P48729 337 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 AFF3P51826 1226 aaKnown RBP14.42□□□□□ -0.1
TRIM39-201ENST00000376656 ERVFRD-1P60508 538 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 ABCA11PQ4W5N1 156 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 OR5L1Q8NGL2 311 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 SGK3Q96BR1 496 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 C14orf144Q96I85 54 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 FAAP24Q9BTP7 215 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 PISDQ9UG56 409 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 HS3ST3B1Q9Y662 390 aa14.42□□□□□ -0.1
TRIM39-201ENST00000376656 ZNF850A8MQ14 1090 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 SLC25A47Q6Q0C1 308 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 SLC16A14Q7RTX9 510 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 ZFP62Q8NB50 900 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-201ENST00000376656 TGIF2-C20orf24A0A0A6YYL0 155 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 ZNF814B7Z6K7 855 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HSD17B6O14756 317 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BKO60814 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BJP06899 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HEXBP07686 556 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BOP23527 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BBP33778 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BDP58876 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 RND3P61587 244 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BCP62807 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 C17orf67Q0P5P2 114 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST2H2BEQ16778 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-201ENST00000376656 SPSB3Q6PJ21 355 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BHQ93079 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 C18orf12Q96KH6 178 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BNQ99877 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 HIST1H2BMQ99879 126 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 B3GALT1Q9Y5Z6 326 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 ST8SIA3O43173 380 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 CA11O75493 328 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 FBLP22087 321 aaKnown RBP14.41□□□□□ -0.1
TRIM39-201ENST00000376656 FASLGP48023 281 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 NOVA1P51513 510 aaKnown RBP14.41□□□□□ -0.1
TRIM39-201ENST00000376656 UBE2KP61086 200 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 IL13RA2Q14627 380 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 LIAT1Q6ZQX7 453 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 GPR61Q9BZJ8 451 aa14.41□□□□□ -0.1
TRIM39-201ENST00000376656 MYO9BQ13459 2157 aa14.4□□□□□ -0.1
TRIM39-201ENST00000376656 A0A1B0GV90 55 aa14.4□□□□□ -0.1
TRIM39-201ENST00000376656 A0A1W2PNR3 127 aa14.4□□□□□ -0.1
TRIM39-201ENST00000376656 ATXN7O15265 892 aaPredicted RBP14.4□□□□□ -0.1
TRIM39-201ENST00000376656 SOD3P08294 240 aa14.4□□□□□ -0.1
TRIM39-201ENST00000376656 QDPRP09417 244 aa14.4□□□□□ -0.1
TRIM39-201ENST00000376656 DUSP1P28562 367 aa14.4□□□□□ -0.1
TRIM39-201ENST00000376656 RNF4P78317 190 aa14.4□□□□□ -0.1
TRIM39-201ENST00000376656 EWSR1Q01844 656 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRIM39-201ENST00000376656 TMEM176BQ3YBM2 270 aaPredicted RBP14.4□□□□□ -0.1
TRIM39-201ENST00000376656 OR2G3Q8NGZ4 309 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms