RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CENPMQ9NSP4 180 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 SEMA5BQ9P283 1151 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 MYOTQ9UBF9 498 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 OR3A1P47881 315 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF774Q6NX45 483 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 OR10A7Q8NGE5 316 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 TMEM59Q9BXS4 323 aa18.06■□□□□ 0.48
TMEFF1-201ENST00000374879 CRYM-AS1A6NIL9 109 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 PLRG1O43660 514 aaKnown RBP18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 SLC35E2P0CK97 266 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 RPL29P47914 159 aaKnown RBP18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 RPL27P61353 136 aaKnown RBP18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 RPL23AP62750 156 aaKnown RBP18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 FOXK1P85037 733 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 GPM6BQ13491 265 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 CHRFAM7AQ494W8 412 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 ARSJQ5FYB0 599 aaPredicted RBP18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 SP5Q6BEB4 398 aaPredicted RBP18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 LYZL2Q7Z4W2 148 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 PRSS58Q8IYP2 241 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 CA13Q8N1Q1 262 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 CLDND2Q8NHS1 167 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 CCNL2Q96S94 520 aaPredicted RBP18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 A0A1B0GU03 582 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 EPHA1P21709 976 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 MSX1P28360 303 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 CDCP2Q5VXM1 449 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 SLC16A14Q7RTX9 510 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 OR5D14Q8NGL3 314 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF519Q8TB69 540 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF2Q9BSG1 426 aaPredicted RBP18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 TMEM242Q9NWH2 141 aa18.05■□□□□ 0.48
TMEFF1-201ENST00000374879 IGKV1D-8A0A087WSZ0 117 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 FAM221AA4D161 298 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 CYB5R3P00387 301 aaPredicted RBP18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 TTRP02766 147 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 FGF5P12034 268 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 NOVA1P51513 510 aaKnown RBP18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 RPP30P78346 268 aaKnown RBP18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 HSF1Q00613 529 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 THEM4Q5T1C6 240 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 FAM185AQ8N0U4 392 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 NOXO1Q8NFA2 376 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 OR8G5Q8NG78 346 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 TMEM210A6NLX4 147 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 IFNL4K9M1U5 179 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 CRTAPO75718 401 aaPredicted RBP18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 KLF8O95600 359 aaPredicted RBP18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 DBHP09172 617 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 JMJD7P0C870 316 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 FOLR1P15328 257 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 TAF9Q16594 264 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 SLC25A26Q70HW3 274 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF440Q8IYI8 595 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 CCL4L1Q8NHW4 92 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 KCNG3Q8TAE7 436 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 DIRC2Q96SL1 478 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 VN1R1Q9GZP7 353 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 VAX2Q9UIW0 290 aa18.04■□□□□ 0.48
TMEFF1-201ENST00000374879 GLI4P10075 376 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 ALDH3B1P43353 468 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 EWSR1Q01844 656 aaKnown RBP eCLIP18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 PMS2P11Q13670 270 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 IQCJQ1A5X6 159 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 COA6Q5JTJ3 125 aaKnown RBP18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 OR1E3Q8WZA6 343 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 DAZLQ92904 295 aaKnown RBP18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 OR8D2Q9GZM6 311 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 H0YGG7 62 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 TP53I11O14683 189 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 CA3P07451 260 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 MMP9P14780 707 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 ARF3P61204 181 aaPredicted RBP18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 RAB11AP62491 216 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 ZFP36L1Q07352 338 aaKnown RBP18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 TRA2AQ13595 282 aaKnown RBP eCLIP18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 C1orf194Q5T5A4 169 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 GAL3ST4Q96RP7 486 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 ASCL3Q9NQ33 180 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 STARD5Q9NSY2 213 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 GAB2Q9UQC2 676 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 V9GYS6 101 aa18.03■□□□□ 0.48
TMEFF1-201ENST00000374879 CDC14CA4D256 554 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF878C9JN71 531 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 CD55P08174 381 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 FAM90A2PQ658T7 463 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF573Q86YE8 665 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 MRPL41Q8IXM3 137 aaKnown RBP18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 OR2AJ1Q8NGZ0 328 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 ZNF385AQ96PM9 386 aaKnown RBP18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 FAAP24Q9BTP7 215 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 SRD5A3Q9H8P0 318 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 TRANK1O15050 2925 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 FAM230AA0A1W2PPH8 454 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 WISP1O95388 367 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 CTSDP07339 412 aaPredicted RBP18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 CST2P09228 141 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 H2BFMP0C1H6 154 aa18.02■□□□□ 0.48
TMEFF1-201ENST00000374879 IL13RA2Q14627 380 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms