RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 LIPT2A6NK58 231 aa9.71□□□□□ -0.86
CCDC40-203ENST00000374877 IGHV2-70P01814 119 aa9.71□□□□□ -0.86
CCDC40-203ENST00000374877 MBPP02686 304 aaPredicted RBP9.71□□□□□ -0.86
CCDC40-203ENST00000374877 APOBEC1P41238 236 aaKnown RBP9.71□□□□□ -0.86
CCDC40-203ENST00000374877 RAB2AP61019 212 aa9.71□□□□□ -0.86
CCDC40-203ENST00000374877 TRA2AQ13595 282 aaKnown RBP eCLIP9.71□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF574Q6ZN55 896 aaPredicted RBP9.71□□□□□ -0.86
CCDC40-203ENST00000374877 WDSUB1Q8N9V3 476 aa9.71□□□□□ -0.86
CCDC40-203ENST00000374877 PIGTQ969N2 578 aa9.71□□□□□ -0.86
CCDC40-203ENST00000374877 PGAM5Q96HS1 289 aa9.71□□□□□ -0.86
CCDC40-203ENST00000374877 PLEKHJ1Q9NW61 149 aa9.71□□□□□ -0.86
CCDC40-203ENST00000374877 MCTS1Q9ULC4 181 aaKnown RBP9.71□□□□□ -0.86
CCDC40-203ENST00000374877 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 NTN3O00634 580 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-203ENST00000374877 IGHG1P01857 330 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 TMEM225BP0DP42 221 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 FCGR2AP12318 317 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 ACP1P24666 158 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 CEBPGP53567 150 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 PIGPP57054 158 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 SLC35A1P78382 337 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 FAM89BQ8N5H3 189 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 TMEM156Q8N614 296 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 COMMD1Q8N668 190 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 FAM213BQ8TBF2 198 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 WFDC1Q9HC57 220 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 ALKBH4Q9NXW9 302 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 B3GAT1Q9P2W7 334 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 TUBD1Q9UJT1 453 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 UNC13CQ8NB66 2214 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 COL5A1P20908 1838 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-203ENST00000374877 LNP1A1A4G5 178 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 SERPINE3A8MV23 424 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 E5RGE8 158 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 IFNA17P01571 189 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 RPS10P46783 165 aaKnown RBP9.7□□□□□ -0.86
CCDC40-203ENST00000374877 ASCL1P50553 236 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 FXYD4P59646 89 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 C17orf67Q0P5P2 114 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 MYBPHQ13203 477 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 TSPO2Q5TGU0 170 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 TCEAL6Q6IPX3 200 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 PLXDC2Q6UX71 529 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 NOXO1Q8NFA2 376 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 OR1L3Q8NH93 324 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 SLC22A8Q8TCC7 542 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF501Q96CX3 271 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-203ENST00000374877 REEP6Q96HR9 211 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 MESP1Q9BRJ9 268 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 PBDC1Q9BVG4 233 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 SLC35B3Q9H1N7 401 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 TMPRSS5Q9H3S3 457 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 SMOC1Q9H4F8 434 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 NSG2Q9Y328 171 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 IGHV5-10-1A0A0J9YXX1 117 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 A0A1W2PNR3 127 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 E9PLN8 166 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 F5H5K5 113 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 YIF1AO95070 293 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 OR2C1O95371 312 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 SEC11BP0C7V7 166 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 FOLR1P15328 257 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 FAHP16930 419 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 KIAA0141Q14154 515 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-203ENST00000374877 RHEBQ15382 184 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 ABCA11PQ4W5N1 156 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 C9orf152Q5JTZ5 239 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 TMEM182Q6ZP80 229 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-203ENST00000374877 SCRT1Q9BWW7 348 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 MRPL13Q9BYD1 178 aaKnown RBP9.7□□□□□ -0.86
CCDC40-203ENST00000374877 KLRF1Q9NZS2 232 aa9.7□□□□□ -0.86
CCDC40-203ENST00000374877 CRYM-AS1A6NIL9 109 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 NPIPB13A6NJU9 1138 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 NPIPB4C9JG80 1138 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 MASP2O00187 686 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 ADAM10O14672 748 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 NDUFS6O75380 124 aaKnown RBP9.69□□□□□ -0.86
CCDC40-203ENST00000374877 CTSDP07339 412 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-203ENST00000374877 OPRM1P35372 400 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 PPP1CCP36873 323 aaKnown RBP9.69□□□□□ -0.86
CCDC40-203ENST00000374877 PMELP40967 661 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 RNF4P78317 190 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 CHAF1BQ13112 559 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF441Q8N8Z8 693 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 OR14K1Q8NGZ2 314 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 TOLLIPQ9H0E2 274 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 KCNIP3Q9Y2W7 256 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 MMP24Q9Y5R2 645 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF850A8MQ14 1090 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 OR5AC1P0C628 307 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 OR5H8P0DN80 308 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 RAB5CP51148 216 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 RRADP55042 308 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 PHLDA2Q53GA4 152 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 SOHLH1Q5JUK2 328 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF600Q6ZNG1 722 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 LYZL2Q7Z4W2 148 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 SUMF1Q8NBK3 374 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 CCDC74BQ96LY2 380 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 GNRHR2Q96P88 292 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms