RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 SLC36A1Q7Z2H8 476 aa12.76□□□□□ -0.37
PFDN6-202ENST00000374607 LINC01356Q8N9X3 169 aa12.76□□□□□ -0.37
PFDN6-202ENST00000374607 OR52N4Q8NGI2 321 aa12.76□□□□□ -0.37
PFDN6-202ENST00000374607 TNFAIP8L1Q8WVP5 186 aa12.76□□□□□ -0.37
PFDN6-202ENST00000374607 EMG1Q92979 244 aaKnown RBP12.76□□□□□ -0.37
PFDN6-202ENST00000374607 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
PFDN6-202ENST00000374607 NEIL1Q96FI4 390 aaPredicted RBP12.76□□□□□ -0.37
PFDN6-202ENST00000374607 WDR13Q9H1Z4 485 aa12.76□□□□□ -0.37
PFDN6-202ENST00000374607 PATZ1Q9HBE1 687 aaKnown RBP12.76□□□□□ -0.37
PFDN6-202ENST00000374607 EXOSC4Q9NPD3 245 aaKnown RBP12.76□□□□□ -0.37
PFDN6-202ENST00000374607 GLS2Q9UI32 602 aa12.76□□□□□ -0.37
PFDN6-202ENST00000374607 TRAV8-7A0A075B6U6 113 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 A0A096LNT2 108 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 MEGF11A6BM72 1044 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 OR2AT4A6NND4 320 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 B4DSR2 109 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 GABRPO00591 440 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 IGHV4-31P0DP07 118 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 MPZP25189 248 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 LMO4P61968 165 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 RSU1Q15404 277 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 UNQ9370/PRO34162Q6UXP9 181 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 ACP7Q6ZNF0 438 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 FAM90A1Q86YD7 464 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 NKAIN3Q8N8D7 197 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 PHYHIPQ92561 330 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 SEH1LQ96EE3 360 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 NDUFB11Q9NX14 153 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 OR14J1Q9UGF5 321 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 ING4Q9UNL4 249 aa12.75□□□□□ -0.37
PFDN6-202ENST00000374607 ANGPTL7O43827 346 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 NOS1APO75052 506 aaPredicted RBP12.74□□□□□ -0.37
PFDN6-202ENST00000374607 FOXH1O75593 365 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 GPX5O75715 221 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 IGFBP3P17936 291 aaPredicted RBP12.74□□□□□ -0.37
PFDN6-202ENST00000374607 SRMP19623 302 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 CPT2P23786 658 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 MYL9P24844 172 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 CALRP27797 417 aaKnown RBP12.74□□□□□ -0.37
PFDN6-202ENST00000374607 PITPNBP48739 271 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 CAPZA1P52907 286 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 FABP5Q01469 135 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 SSX1Q16384 188 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 FAM27D1Q5T7N8 215 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 GLT8D1Q68CQ7 371 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 FAM166AQ6J272 317 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 ZNF529Q6P280 563 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 MED30Q96HR3 178 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 CCL13Q99616 98 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 SMR3AQ99954 134 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 SSBP3Q9BWW4 388 aaPredicted RBP12.74□□□□□ -0.37
PFDN6-202ENST00000374607 YAE1D1Q9NRH1 226 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 PCDHB16Q9NRJ7 776 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 CLN8Q9UBY8 286 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 SSR3Q9UNL2 185 aa12.74□□□□□ -0.37
PFDN6-202ENST00000374607 FLNAP21333 2647 aaKnown RBP12.74□□□□□ -0.37
PFDN6-202ENST00000374607 NDUFB3O43676 98 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 LY6G6DO95868 133 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 CSTBP04080 98 aaKnown RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 ACAA1P09110 424 aaPredicted RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 WNT2P09544 360 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 UCHL1P09936 223 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 ZNF16P17020 682 aaPredicted RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 PRKACAP17612 351 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 BCL3P20749 454 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 PTGFRP43088 359 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 NPY4RP50391 375 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 SNU13P55769 128 aaKnown RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 LCN2P80188 198 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 IKZF1Q13422 519 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 LRRC10Q5BKY1 277 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 SYT6Q5T7P8 510 aaPredicted RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 LYPD2Q6UXB3 125 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 GLCCI1Q86VQ1 547 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 SAXO1Q8IYX7 474 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 FAM58AQ8N1B3 248 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 ZSCAN4Q8NAM6 433 aaPredicted RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 FOXRED1Q96CU9 486 aaPredicted RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 MSI2Q96DH6 328 aaKnown RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 NRIP2Q9BQI9 281 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 METTL9Q9H1A3 318 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 OR5V1Q9UGF6 321 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 KCNS2Q9ULS6 477 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 STUB1Q9UNE7 303 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 GSTK1Q9Y2Q3 226 aa12.73□□□□□ -0.37
PFDN6-202ENST00000374607 SF3B6Q9Y3B4 125 aaKnown RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 SETD2Q9BYW2 2564 aaPredicted RBP12.73□□□□□ -0.37
PFDN6-202ENST00000374607 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 MAGEA13PA6NCF6 341 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 RFPL4AA6NLU0 287 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 FAM157AC9JC47 383 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 RFPL4AL1F8VTS6 287 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 PIN1P1O15428 100 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 CD5LO43866 347 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 MSMBP08118 114 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 CALCBP10092 127 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 PSG2P11465 335 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 CD36P16671 472 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 OR3A4PP47883 348 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms