RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 HTR3BO95264 441 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 IFNA2P01563 188 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 RSU1Q15404 277 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 ANKRD55Q3KP44 614 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 PDSS1Q5T2R2 415 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 PXDC1Q5TGL8 231 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 EIF5AL1Q6IS14 154 aaKnown RBP12.15□□□□□ -0.47
HMGCL-203ENST00000374490 AAED1Q7RTV5 226 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 ZSCAN4Q8NAM6 433 aaPredicted RBP12.15□□□□□ -0.47
HMGCL-203ENST00000374490 OR2V1Q8NHB1 315 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 ARL11Q969Q4 196 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 SLC6A15Q9H2J7 730 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 GPR173Q9NS66 373 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 DECR2Q9NUI1 292 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF701Q9NV72 531 aaPredicted RBP12.15□□□□□ -0.47
HMGCL-203ENST00000374490 IL36GQ9NZH8 169 aa12.15□□□□□ -0.47
HMGCL-203ENST00000374490 DMXL2Q8TDJ6 3036 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 MPTX1A8MV57 137 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 LINC01387J3KSC0 135 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 APOC3P02656 99 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 DBHP09172 617 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 TCN2P20062 427 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 IL15RAQ13261 267 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 SNAI3Q3KNW1 292 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 H3F3CQ6NXT2 135 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 GALNTL5Q7Z4T8 443 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 BPIFCQ8NFQ6 507 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 PHF3Q92576 2039 aaKnown RBP12.14□□□□□ -0.47
HMGCL-203ENST00000374490 BORCS8Q96FH0 119 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 TIMM10BQ9Y5J6 103 aa12.14□□□□□ -0.47
HMGCL-203ENST00000374490 PMS2P1A4D2B8 440 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF716A6NP11 495 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 H0YIZ8 118 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 SDCBPO00560 298 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-203ENST00000374490 ADAP1O75689 374 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 IFNA21P01568 189 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 CD79AP11912 226 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 ATF4P18848 351 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-203ENST00000374490 GLRA1P23415 457 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 GABRR1P24046 479 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 RBP2P50120 134 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 SMCO1Q147U7 214 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 NRN1LQ496H8 165 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 TMEM42Q69YG0 159 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 UNQ6126/PRO20091Q6UXV3 157 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 IL34Q6ZMJ4 242 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 PPP1R32Q7Z5V6 425 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 GGNQ86UU5 652 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 CT55Q8WUE5 264 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF2Q9BSG1 426 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-203ENST00000374490 C12orf4Q9NQ89 552 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 ZC4H2Q9NQZ6 224 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 CYTL1Q9NRR1 136 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 ASF1BQ9NVP2 202 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 NECAP2Q9NVZ3 263 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 ATPIF1Q9UII2 106 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 ANXA10Q9UJ72 324 aa12.13□□□□□ -0.47
HMGCL-203ENST00000374490 XRCC2O43543 280 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 LCATP04180 440 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 PMELP40967 661 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 HTR5AP47898 357 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 NKAPLQ5M9Q1 402 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF774Q6NX45 483 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF585AQ6P3V2 769 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 C6orf201Q7Z4U5 140 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 ESX1Q8N693 406 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 OR5T2Q8NGG2 359 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 OR1S2Q8NGQ3 325 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 FNDC9Q8TBE3 224 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 CPNE4Q96A23 557 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-203ENST00000374490 TMEM45BQ96B21 275 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 SAT2Q96F10 170 aaPredicted RBP12.12□□□□□ -0.47
HMGCL-203ENST00000374490 ADGRG7Q96K78 797 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 FOXB1Q99853 325 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 CRLF2Q9HC73 371 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 TCFL5Q9UL49 500 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 MCTS1Q9ULC4 181 aaKnown RBP12.12□□□□□ -0.47
HMGCL-203ENST00000374490 SLC7A11Q9UPY5 501 aa12.12□□□□□ -0.47
HMGCL-203ENST00000374490 CRYM-AS1A6NIL9 109 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 LRRC3CA6NJW4 275 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 C9orf172C9J069 976 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 TERTO14746 1132 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 CXCL13O43927 109 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 NRASP01111 189 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 SERPINA7P05543 415 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF32P17041 273 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 PI3P19957 117 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 ACKR3P25106 362 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 OTX2P32243 289 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 PTGER4P35408 488 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 FUT6P51993 359 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 RAB32Q13637 225 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 SSPNQ14714 243 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 OR8B8Q15620 311 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF468Q5VIY5 522 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 RPUSD3Q6P087 351 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms