RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 DHFRP00374 187 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 SEZ6L2Q6UXD5 910 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 WDR86Q86TI4 376 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 RELL2Q8NC24 303 aaPredicted RBP11.78□□□□□ -0.52
PTPRF-202ENST00000372405 GIMAP1Q8WWP7 306 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 SLC6A7Q99884 636 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 NPDC1Q9NQX5 325 aaPredicted RBP11.78□□□□□ -0.52
PTPRF-202ENST00000372405 MTCH1Q9NZJ7 389 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 POLEQ07864 2286 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 IQCF6A8MYZ5 107 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 PYCARD-AS1I3L0S3 204 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 SYNGR1O43759 233 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 NAT1P18440 290 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 BCL3P20749 454 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 ZNF83P51522 516 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 RBM11P57052 281 aaKnown RBP11.78□□□□□ -0.52
PTPRF-202ENST00000372405 NAAAQ02083 359 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 MRGPRGQ86SM5 289 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 BEST4Q8NFU0 473 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 MRPS24Q96EL2 167 aaKnown RBP11.78□□□□□ -0.52
PTPRF-202ENST00000372405 OCSTAMPQ9BR26 566 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 ACTR6Q9GZN1 396 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 IFT46Q9NQC8 304 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 ST3GAL6Q9Y274 331 aa11.78□□□□□ -0.52
PTPRF-202ENST00000372405 OR5B21A6NL26 309 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 AKR7A2O43488 359 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 SLC34A2O95436 690 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 HPXP02790 462 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 AMY2AP04746 511 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 CHATP28329 748 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 HRH1P35367 487 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 RRAS2P62070 204 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-202ENST00000372405 KLRB1Q12918 225 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 PDCD1Q15116 288 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 RBMS2Q15434 407 aaKnown RBP11.77□□□□□ -0.53
PTPRF-202ENST00000372405 ST3GAL2Q16842 350 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 NKAPLQ5M9Q1 402 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 ATAD3CQ5T2N8 411 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 ALKBH2Q6NS38 261 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 HAGHLQ6PII5 290 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-202ENST00000372405 TMEM200AQ86VY9 491 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 SAXO1Q8IYX7 474 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 OR10AD1Q8NGE0 317 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 HIST1H2AAQ96QV6 131 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 GINS4Q9BRT9 223 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 OR51I2Q9H344 312 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 PIGMQ9H3S5 423 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 MOV10Q9HCE1 1003 aaKnown RBP11.77□□□□□ -0.53
PTPRF-202ENST00000372405 JKAMPQ9P055 326 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 IL36RNQ9UBH0 155 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 RELNP78509 3460 aa11.77□□□□□ -0.53
PTPRF-202ENST00000372405 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 ANXA7P20073 488 aaKnown RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 RAD52P43351 418 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 MECP2P51608 486 aaKnown RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 GNG3P63215 75 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 ARFRP1Q13795 201 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 NKPD1Q17RQ9 610 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 MSMPQ1L6U9 139 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 ELP2Q6IA86 826 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 BRICD5Q6PL45 260 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 MRGPRFQ96AM1 343 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 SULT4A1Q9BR01 284 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 HDHD3Q9BSH5 251 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 FAAP24Q9BTP7 215 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 PLEKHJ1Q9NW61 149 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 ZNF230Q9UIE0 474 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 HSF4Q9ULV5 492 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 FZR1Q9UM11 496 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 H0YL77 283 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 RHBDL1O75783 438 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 CSN2P05814 226 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 MPZP25189 248 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 EIF2B2P49770 351 aaKnown RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 PPA1Q15181 289 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 MICBQ29980 383 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 FAM76BQ5HYJ3 339 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 IDO2Q6ZQW0 420 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 PIAS4Q8N2W9 510 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 BPIFB2Q8N4F0 458 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 OR13C8Q8NGS7 320 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 MAFIPQ8WZ33 124 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 EMG1Q92979 244 aaKnown RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 ZNF488Q96MN9 340 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 FYTTD1Q96QD9 318 aaKnown RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 DMRTA2Q96SC8 542 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 OR51J1Q9H342 316 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 PRORYQ9H606 182 aa11.76□□□□□ -0.53
PTPRF-202ENST00000372405 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 PURGQ9UJV8 347 aaKnown RBP11.76□□□□□ -0.53
PTPRF-202ENST00000372405 M0R1B8 84 aa11.75□□□□□ -0.53
PTPRF-202ENST00000372405 MLNRO43193 412 aa11.75□□□□□ -0.53
PTPRF-202ENST00000372405 CA11O75493 328 aa11.75□□□□□ -0.53
PTPRF-202ENST00000372405 VSIG10L2P0DP72 767 aa11.75□□□□□ -0.53
PTPRF-202ENST00000372405 RBPJQ06330 500 aa11.75□□□□□ -0.53
PTPRF-202ENST00000372405 CBX3Q13185 183 aa11.75□□□□□ -0.53
PTPRF-202ENST00000372405 RNASE10Q5GAN6 216 aaKnown RBP11.75□□□□□ -0.53
PTPRF-202ENST00000372405 HOGA1Q86XE5 327 aa11.75□□□□□ -0.53
PTPRF-202ENST00000372405 ZNF573Q86YE8 665 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms