RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 UCK1Q9HA47 277 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 POLDIP2Q9Y2S7 368 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 RGPD3A6NKT7 1758 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 WDR90Q96KV7 1748 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 ABCD4O14678 606 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 DCTDP32321 178 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF90Q03938 601 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF718Q3SXZ3 478 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR51I2Q9H344 312 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 NARFLQ9H6Q4 476 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 SHROOM3Q8TF72 1996 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 SFTPCP11686 197 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 NKG7Q16617 165 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 STUMQ69YW2 141 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 GLDNQ6ZMI3 551 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 LOXL4Q96JB6 756 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 WDFY2Q96P53 400 aa11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 TMEFF2Q9UIK5 374 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-201ENST00000372189 TTC3P53804 2025 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 PMCHP20382 165 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 FCARP24071 287 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 AGFG1P52594 562 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 RAE1P78406 368 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 FAM74A1Q5RGS3 127 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 C12orf73Q69YU5 71 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 PRSS41Q7RTY9 318 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 TMEM229BQ8NBD8 167 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 HMGCLL1Q8TB92 370 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF727A8MUV8 499 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 ENDOGQ14249 297 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR4C16Q8NGL9 310 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR52N5Q8NH56 324 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 MTCH1Q9NZJ7 389 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 SCN1AP35498 2009 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 ACSM4P0C7M7 580 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 BMP5P22003 454 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 RNPS1Q15287 305 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 KIRREL2Q6UWL6 708 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 H2BFWTQ7Z2G1 175 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 APOBEC4Q8WW27 367 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 WDR34Q96EX3 536 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 WDR89Q96FK6 387 aaPredicted RBP11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 JAM3Q9BX67 310 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 CYSLTR2Q9NS75 346 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 C21orf140B9A014 251 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 HS3ST1O14792 307 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 B4GALT1P15291 398 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 HRH1P35367 487 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 SPCS3P61009 180 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 BTLAQ7Z6A9 289 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR2M7Q8NG81 312 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR5AP2Q8NGF4 316 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 TCFL5Q9UL49 500 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 R4GMQ9 66 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 MYO10Q9HD67 2058 aa11.92□□□□□ -0.5
RAPGEF1-201ENST00000372189 IGHV5-10-1A0A0J9YXX1 117 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 SLC25A35Q3KQZ1 300 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 PPP1R1CQ8WVI7 109 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 RBM38Q9H0Z9 239 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 SIRT3Q9NTG7 399 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 AQP8O94778 261 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 CCL4P13236 92 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 YBX1P67809 324 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 PMS2P11Q13670 270 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 PRICKLE4Q2TBC4 344 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 PRAMEF5Q5TYX0 476 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 PRAMEF6Q5VXH4 476 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 TMEM123Q8N131 208 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR52B4Q8NGK2 314 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 CIB3Q96Q77 187 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 MYO7AQ13402 2215 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 DHHO43323 396 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 PRR35P0CG20 571 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 PLAC9Q5JTB6 97 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 LHFPL2Q6ZUX7 228 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 NOXO1Q8NFA2 376 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 GPX8Q8TED1 209 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 FBXW5Q969U6 566 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 WASHC3Q9Y3C0 194 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 FER1L6Q2WGJ9 1857 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 NKX2-2O95096 273 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 LINC00303Q3SY05 128 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 RGS7BPQ6MZT1 257 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 THNSL2Q86YJ6 484 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 D2HGDHQ8N465 521 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 GNRHR2Q96P88 292 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 SHISA8B8ZZ34 492 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 CYR61O00622 381 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 SH2D1BO14796 132 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 SHBQ15464 509 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 STPG1Q5TH74 334 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 OR51H1Q8NH63 302 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 HES7Q9BYE0 225 aa11.91□□□□□ -0.5
RAPGEF1-201ENST00000372189 CTDSP1Q9GZU7 261 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms