RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CTSCP53634 463 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM65Q6PI78 240 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM179BQ7Z7N9 219 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 MIEN1Q9BRT3 115 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 PDPNQ86YL7 162 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 RPS4Y2Q8TD47 263 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 PPIAP62937 165 aaKnown RBP13.74□□□□□ -0.21
COL5A1-201ENST00000371817 FZD2Q14332 565 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 MARCH3Q86UD3 253 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 SLC35E2P0CK97 266 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 S1PR5Q9H228 398 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF217O75362 1048 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 PVRP15151 417 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 OVCH2Q7RTZ1 564 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 SLC25A43Q8WUT9 341 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF195O14628 629 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 DUSP8Q13202 625 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 TUSC5Q8IXB3 177 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 OR1L1Q8NH94 360 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 PDXPQ96GD0 296 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 TMPRSS11DO60235 418 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 SMPD2O60906 423 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 SFT2D2O95562 160 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 FAHD2BQ6P2I3 314 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM64Q6YI46 380 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 ZDHHC23Q8IYP9 409 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 MZB1Q8WU39 189 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL5A1-201ENST00000371817 RPL30P62888 115 aaKnown RBP13.74□□□□□ -0.21
COL5A1-201ENST00000371817 CXCL3P19876 107 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 SLC35E3Q7Z769 313 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 HIST1H4GQ99525 98 aa13.74□□□□□ -0.21
COL5A1-201ENST00000371817 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-201ENST00000371817 PRSS37A4D1T9 235 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 FCMRO60667 390 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 SPPL3Q8TCT6 385 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 RNF133Q8WVZ7 376 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM56Q96MV1 263 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 EMC6Q9BV81 110 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 HEPACAM2A8MVW5 462 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 SELENOPP49908 381 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 SFXN1Q9H9B4 322 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 RGRP47804 291 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 NPBWR2P48146 333 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 PEF1Q9UBV8 284 aaKnown RBP13.73□□□□□ -0.21
COL5A1-201ENST00000371817 OR4C45A6NMZ5 311 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 M0R082 166 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 OR5AC1P0C628 307 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 TCL1AP56279 114 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 CLDN18P56856 261 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 FUT7Q11130 342 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 LYPD8Q6UX82 237 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 CD99L2Q8TCZ2 262 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 FGF2P09038 288 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 HNRNPA1P09651 372 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL5A1-201ENST00000371817 HOXA6P31267 233 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 SCAND1P57086 179 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 SAMD13Q5VXD3 122 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF346Q9UL40 294 aaKnown RBP13.73□□□□□ -0.21
COL5A1-201ENST00000371817 SPTA1P02549 2419 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 CDK2AP1O14519 115 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF121P58317 390 aaPredicted RBP13.73□□□□□ -0.21
COL5A1-201ENST00000371817 DUSP5Q16690 384 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 PRSS36Q5K4E3 855 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 CALHM1Q8IU99 346 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 ROBO4Q8WZ75 1007 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 VCX2Q9H322 139 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 SLC7A10Q9NS82 523 aa13.73□□□□□ -0.21
COL5A1-201ENST00000371817 OR1D5P58170 312 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 GAB4Q2WGN9 574 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 RNF165Q6ZSG1 346 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 TAS1R1Q7RTX1 841 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 OR6C1Q96RD1 312 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 GGACTQ9BVM4 153 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 LRRC37A3O60309 1634 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 DHRS7CA6NNS2 312 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 HIST1H1BP16401 226 aaKnown RBP13.72□□□□□ -0.21
COL5A1-201ENST00000371817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 MRGPRGQ86SM5 289 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 MRPS2Q9Y399 296 aaKnown RBP13.72□□□□□ -0.21
COL5A1-201ENST00000371817 CXorf65A6NEN9 183 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 C21orf58P58505 322 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 GAMTQ14353 236 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 NKAIN2Q5VXU1 208 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 A4GNTQ9UNA3 340 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 WNK2Q9Y3S1 2297 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 ARR3P36575 388 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 PFN3P60673 137 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 SAP30LQ9HAJ7 183 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 PARP11Q9NR21 331 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 TIMM10BQ9Y5J6 103 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 MRC1P22897 1456 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 ATRXP46100 2492 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 PTPRZ1P23471 2315 aaPredicted RBP13.72□□□□□ -0.21
COL5A1-201ENST00000371817 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
COL5A1-201ENST00000371817 PLPP2O43688 288 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 IGFBP7Q16270 282 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 SMIM21Q3B7S5 101 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 C5orf49A4QMS7 147 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 MFSD2BA6NFX1 497 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms