RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 LMO7DNF2Z398 122 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 MMP7P09237 267 aaPredicted RBP15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 PMS2P11Q13670 270 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 ZNF345Q14585 488 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 FFAR4Q5NUL3 377 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 TMEM65Q6PI78 240 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 ST6GALNAC2Q9UJ37 374 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 ERRFI1Q9UJM3 462 aaPredicted RBP15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 ELOA3CA0A087WX78 387 aaPredicted RBP15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 PNRC1Q12796 327 aaPredicted RBP15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 PRR27Q6MZM9 219 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 DGAT2L6Q6ZPD8 337 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 OPN1MWP04001 364 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 OPN1MW2P0DN77 364 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 OPN1MW3P0DN78 364 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 PMCHP20382 165 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 RPL29P47914 159 aaKnown RBP15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 ERHP84090 104 aaKnown RBP15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 PSG6Q00889 435 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 C6orf15Q6UXA7 325 aaPredicted RBP15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 OVCH2Q7RTZ1 564 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 ZNF355PQ9NSJ1 428 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 ADH4P08319 380 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 C9orf152Q5JTZ5 239 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 ATG4DQ86TL0 474 aaPredicted RBP15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 MENTQ9BUN1 341 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 RAB33BQ9H082 229 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 LIPGQ9Y5X9 500 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 ZNF737O75373 536 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 TMIGD3P0DMS9 266 aaPredicted RBP15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 CHRNB4P30926 498 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 BPIFB3P59826 476 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 ZNF707Q96C28 371 aaPredicted RBP15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 PECRQ9BY49 303 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 ICAM5Q9UMF0 924 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 TNFSF18Q9UNG2 199 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 CBY3A6NI87 242 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 CNIH1O95406 144 aa15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 POLR2GP62487 172 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 ALX4Q9H161 411 aaPredicted RBP15.23■□□□□ 0.03
PTP4A1-201ENST00000370651 A0A1W2PNV4 684 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 SOCS1O15524 211 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 SULT1A1P50225 295 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 MFNGO00587 321 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 TMEM11P17152 192 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 P2RY1P47900 373 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 ZNF273Q14593 569 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 IFI44Q8TCB0 444 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 OIT3Q8WWZ8 545 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 ANXA10Q9UJ72 324 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 DRD3P35462 400 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 FAM173AQ9BQD7 235 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 CACNG5Q9UF02 275 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 A0A087X0M5 115 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 A0A1B0GX30 115 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 CSN1S1P47710 185 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 GNG3P63215 75 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 IL24Q13007 206 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 EIF4EBP2Q13542 120 aaPredicted RBP15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 CD226Q15762 336 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 DEFB108BQ8NET1 73 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 UBALD1Q8TB05 177 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 DEFB127Q9H1M4 99 aa15.22■□□□□ 0.03
PTP4A1-201ENST00000370651 CNN1P51911 297 aaKnown RBP15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 RPS16P62249 146 aaKnown RBP15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 LAIR2Q6ISS4 152 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 VSTM2LQ96N03 204 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 KLF13Q9Y2Y9 288 aaPredicted RBP15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 EFNB2P52799 333 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 C1QL3Q5VWW1 255 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 MOB1BQ7L9L4 216 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 ASB5Q8WWX0 329 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 LAMB2P55268 1798 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 ANKRD34CP0C6C1 535 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 HOXC8P31273 242 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 CHRNA7P36544 502 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 TSEN54Q7Z6J9 526 aaKnown RBP15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 ZAR1Q86SH2 424 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 OR10G3Q8NGC4 313 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 OR8B12Q8NGG6 310 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 FOCADQ5VW36 1801 aa15.21■□□□□ 0.03
PTP4A1-201ENST00000370651 CST2P09228 141 aa15.21■□□□□ 0.02
PTP4A1-201ENST00000370651 GABRG2P18507 467 aa15.21■□□□□ 0.02
PTP4A1-201ENST00000370651 USB1Q9BQ65 265 aaKnown RBP15.21■□□□□ 0.02
PTP4A1-201ENST00000370651 GINS3Q9BRX5 216 aa15.21■□□□□ 0.02
PTP4A1-201ENST00000370651 TMEM30CPA0ZSE6 113 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 RPS23P62266 143 aaKnown RBP15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 TMEM183BQ1AE95 376 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 LYRM2Q9NU23 88 aaPredicted RBP15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 NAT8BQ9UHF3 227 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 ARL16Q0P5N6 197 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 ZNF774Q6NX45 483 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 PARP11Q9NR21 331 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 DOCK1Q14185 1865 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 IGHV5-51A0A0C4DH38 117 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 FGF8P55075 233 aaPredicted RBP15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 SMIM21Q3B7S5 101 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 BSXQ3C1V8 233 aa15.2■□□□□ 0.02
PTP4A1-201ENST00000370651 FAM122AQ96E09 287 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms