RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 RIMS4Q9H426 269 aaPredicted RBP8.89□□□□□ -0.99
TPM3-209ENST00000368527 LDAHQ9H6V9 325 aa8.89□□□□□ -0.99
TPM3-209ENST00000368527 ZNF703Q9H7S9 590 aaPredicted RBP8.89□□□□□ -0.99
TPM3-209ENST00000368527 PLEKHA2Q9HB19 425 aa8.89□□□□□ -0.99
TPM3-209ENST00000368527 SPACA1Q9HBV2 294 aa8.89□□□□□ -0.99
TPM3-209ENST00000368527 C12orf4Q9NQ89 552 aa8.89□□□□□ -0.99
TPM3-209ENST00000368527 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
TPM3-209ENST00000368527 TAS2R3Q9NYW6 316 aa8.89□□□□□ -0.99
TPM3-209ENST00000368527 ZNF230Q9UIE0 474 aaPredicted RBP8.89□□□□□ -0.99
TPM3-209ENST00000368527 FBXO9Q9UK97 447 aaPredicted RBP8.89□□□□□ -0.99
TPM3-209ENST00000368527 A0A1W2PP11 408 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 FAM230AA0A1W2PPH8 454 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 KLRC4-KLRK1H3BQV0 150 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 CST4P01036 141 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 PDGFBP01127 241 aaPredicted RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 GAPDHP04406 335 aaKnown RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 FCGR3AP08637 254 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 MMP7P09237 267 aaPredicted RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 CTXN2P0C2S0 81 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 ZNF728P0DKX0 622 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 OR5H8P0DN80 308 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 LIPCP11150 499 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 B4GALT1P15291 398 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 RPS2P15880 293 aaKnown RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 FUT3P21217 361 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 GABRR1P24046 479 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 ACKR3P25106 362 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 PPIAP62937 165 aaKnown RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 SUPT4H1P63272 117 aaKnown RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 PLP2Q04941 152 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 IL15RAQ13261 267 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 ABCA11PQ4W5N1 156 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 PLCXD3Q63HM9 321 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 IL34Q6ZMJ4 242 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 TIPARPQ7Z3E1 657 aaKnown RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 SKA3Q8IX90 412 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 MKXQ8IYA7 352 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 OR5D18Q8NGL1 313 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 NANOS1Q8WY41 292 aaKnown RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 ROBO4Q8WZ75 1007 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 GTF3AQ92664 365 aaKnown RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 ARL11Q969Q4 196 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 APOBEC3DQ96AK3 386 aaPredicted RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 ZNF2Q9BSG1 426 aaPredicted RBP8.88□□□□□ -0.99
TPM3-209ENST00000368527 TMEM100Q9NV29 134 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 TUBD1Q9UJT1 453 aa8.88□□□□□ -0.99
TPM3-209ENST00000368527 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 ZNF850A8MQ14 1090 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 JTBO76095 146 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 HOXD4P09016 255 aaPredicted RBP8.87□□□□□ -0.99
TPM3-209ENST00000368527 RFPL3SP0C7P2 107 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 ZNF708P17019 499 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 CD82P27701 267 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 LHX2P50458 406 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 RBM11P57052 281 aaKnown RBP8.87□□□□□ -0.99
TPM3-209ENST00000368527 BLOC1S1P78537 153 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 SLC9A3R2Q15599 337 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 MPV17LQ2QL34 196 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 PABPC1L2AQ5JQF8 200 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 NKAPLQ5M9Q1 402 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 C6orf201Q7Z4U5 140 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 MCEMP1Q8IX19 187 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 OR5L1Q8NGL2 311 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 ABHD14BQ96IU4 210 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 CNTNAP3BQ96NU0 1288 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 ALKBH3Q96Q83 286 aaPredicted RBP8.87□□□□□ -0.99
TPM3-209ENST00000368527 HIST1H2AAQ96QV6 131 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 RNF126Q9BV68 326 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 CNTNAP3Q9BZ76 1288 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 PRRG4Q9BZD6 226 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 SLC6A15Q9H2J7 730 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 NAA60Q9H7X0 242 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 ACKR4Q9NPB9 350 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 AK3Q9UIJ7 227 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
TPM3-209ENST00000368527 POMT1Q9Y6A1 747 aa8.87□□□□□ -0.99
TPM3-209ENST00000368527 A0A0G2JMM0 328 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 KIR2DS1A0A191URI9 304 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 A0A1W2PPB8 328 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 DUXBA0A1W2PPF3 345 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 A0A1W2PRS3 328 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 C5orf63A6NC05 138 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 KIR3DP1A8MWS1 328 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 C9orf172C9J069 976 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 E5RGE8 158 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 NEURL1O76050 574 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 MT-CO3P00414 261 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 SP9P0CG40 484 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 GLRA1P23415 457 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 S100GP29377 79 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 KIR2DS4P43632 304 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 CLDN18P56856 261 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 HERV-K104P61576 105 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 RPS18P62269 152 aaKnown RBP8.86□□□□□ -0.99
TPM3-209ENST00000368527 ZNF92Q03936 586 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 RBM39Q14498 530 aaKnown RBP8.86□□□□□ -0.99
TPM3-209ENST00000368527 KIR2DS1Q14954 304 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 ATXN7L3Q14CW9 347 aaPredicted RBP8.86□□□□□ -0.99
TPM3-209ENST00000368527 OR1C1Q15619 314 aa8.86□□□□□ -0.99
TPM3-209ENST00000368527 TAF9Q16594 264 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms