RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 MRPL48Q96GC5 212 aaKnown RBP1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 ADTRPQ96IZ2 230 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 SEC22CQ9BRL7 303 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 TMED9Q9BVK6 235 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 TBL1XR1Q9BZK7 514 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 TMEM38BQ9NVV0 291 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 IL37Q9NZH6 218 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 A0A1W2PNN7 141 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 IZUMO1RA6ND01 250 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 H7C2Y5 167 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 UPK1AO00322 258 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 RNF113AO15541 343 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 IGHV1-46P01743 117 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 RHOCP08134 193 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 HLA-GP17693 338 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 RGS6P49758 472 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 TAS2R60P59551 318 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 RPS11P62280 158 aaKnown RBP eCLIP1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 RPL10AP62906 217 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 CDNFQ49AH0 187 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 TMEM69Q5SWH9 247 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 KCTD16Q68DU8 428 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 THOC7Q6I9Y2 204 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 CLEC19AQ6UXS0 136 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 FA2HQ7L5A8 372 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 LRRC8AQ8IWT6 810 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 ATPAF2Q8N5M1 289 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 CCNYL1Q8N7R7 359 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 SLC26A10Q8NG04 563 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 OR4D6Q8NGJ1 314 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 OR2K2Q8NGT1 345 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 NT5CQ8TCD5 201 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 ZFAND1Q8TCF1 268 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 SMIM8Q96KF7 97 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 METTL26Q96S19 204 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 PDCD1LG2Q9BQ51 273 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 SHCBP1LQ9BZQ2 653 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 COA1Q9GZY4 146 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 SLC38A1Q9H2H9 487 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 ASB7Q9H672 318 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 VSIRQ9H7M9 311 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 C6orf50Q9HD87 102 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 BZW2Q9Y6E2 419 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 ZSWIM8A7E2V4 1837 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 NID2Q14112 1375 aa1.67□□□□□ -2.14
ECHDC1-201ENST00000368287 SLC5A10A0PJK1 596 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 OR6C70A6NIJ9 312 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 PRMT5O14744 637 aaPredicted RBP1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ENSAO43768 121 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 NRASP01111 189 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 HRASP01112 189 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 KRASP01116 189 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 IGLV7-43P04211 117 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 PFN1P07737 140 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 M6PRP20645 277 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 TEAD1P28347 426 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 MPIP34949 423 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 PSMB2P49721 201 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ERFP50548 548 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ATP5G2Q06055 141 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 MAPRE2Q15555 327 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 TAF9Q16594 264 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 HSP90AA4PQ58FG1 418 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 FAM104BQ5XKR9 115 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 PID1Q7Z2X4 250 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ADM2Q7Z4H4 148 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 FAM19A1Q7Z5A9 133 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 FAM58AQ8N1B3 248 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 CYP4Z2PQ8N1L4 340 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 CA13Q8N1Q1 262 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 GAPTQ8N292 157 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 SYS1Q8N2H4 156 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 RNF10Q8N5U6 811 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ZNF555Q8NEP9 628 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ORAOV1Q8WV07 137 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ZNF75CPQ92670 426 aaPredicted RBP1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 RBPMSQ93062 196 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 HINT2Q9BX68 163 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 PRRG3Q9BZD7 231 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 FAM60AQ9NP50 221 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 RBM12B-AS1Q9P1G2 102 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ZNF492Q9P255 531 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 STX18Q9P2W9 335 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 PRO0628Q9UI54 55 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 ZNF229Q9UJW7 825 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 RAB23Q9ULC3 237 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 CFL2Q9Y281 166 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 RBMX2Q9Y388 322 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 VWA8A3KMH1 1905 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 MROH5Q6ZUA9 1318 aa1.66□□□□□ -2.14
ECHDC1-201ENST00000368287 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.14
ECHDC1-201ENST00000368287 AQRO60306 1485 aaKnown RBP eCLIP1.65□□□□□ -2.15
ECHDC1-201ENST00000368287 VAPBO95292 243 aa1.65□□□□□ -2.15
ECHDC1-201ENST00000368287 OR4Q2P0C623 313 aa1.65□□□□□ -2.15
ECHDC1-201ENST00000368287 INAFM2P0DMQ5 153 aa1.65□□□□□ -2.15
ECHDC1-201ENST00000368287 ZNF35P13682 527 aa1.65□□□□□ -2.15
ECHDC1-201ENST00000368287 TUFMP49411 452 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-201ENST00000368287 OR12D2P58182 307 aa1.65□□□□□ -2.15
ECHDC1-201ENST00000368287 BAMBIQ13145 260 aa1.65□□□□□ -2.15
ECHDC1-201ENST00000368287 SPIN3Q5JUX0 258 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms