RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TINAGQ9UJW2 476 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 NEU3Q9UQ49 428 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 LAMB2P55268 1798 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 SEC14L6B5MCN3 397 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 H7BYZ3 331 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 TAAR5O14804 337 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 BCL3P20749 454 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 H3F3AP84243 136 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 GAB4Q2WGN9 574 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 COL13A1Q5TAT6 717 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-207ENST00000368226 TMEM211Q6ICI0 200 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 CLEC9AQ6UXN8 241 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 SPNS3Q6ZMD2 512 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 C9orf40Q8IXQ3 194 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 OR13D1Q8NGV5 346 aa11.43□□□□□ -0.58
PTPRK-207ENST00000368226 POLR2AP24928 1970 aaKnown RBP11.42□□□□□ -0.58
PTPRK-207ENST00000368226 TRAV39A0A0B4J263 110 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 C1QCP02747 245 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 ZNF17P17021 662 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 CD96P40200 585 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 KIAA0141Q14154 515 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-207ENST00000368226 ZNRF4Q8WWF5 429 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 CIB3Q96Q77 187 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-207ENST00000368226 A0A1B0GUH1 482 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 PDZK1IP1Q13113 114 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 GAMTQ14353 236 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 BTNL8Q6UX41 500 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 DGAT2L6Q6ZPD8 337 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 OR5V1Q9UGF6 321 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 SH2D7A6NKC9 451 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-207ENST00000368226 DBX1A6NMT0 343 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 CRYBB2P43320 205 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 MMP15P51511 669 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 LSM11P83369 360 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPRK-207ENST00000368226 C10orf90Q96M02 699 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 CYR61O00622 381 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 FCER1GP30273 86 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 OR2B8PP59922 312 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 FOXO1Q12778 655 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 SSX1Q16384 188 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 FAM122BQ7Z309 247 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 LFNGQ8NES3 379 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 SMIM7Q9BQ49 75 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 POMT1Q9Y6A1 747 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 TRIP12Q14669 1992 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-207ENST00000368226 PPP5D1E7EU14 171 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 TIGITQ495A1 244 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 SSX7Q7RTT5 188 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 RAB1BQ9H0U4 201 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 AKIP1Q9NQ31 210 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 ZNF275Q9NSD4 429 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-207ENST00000368226 NAGKQ9UJ70 344 aa11.42□□□□□ -0.58
PTPRK-207ENST00000368226 THSD7AQ9UPZ6 1657 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 RGPD4Q7Z3J3 1758 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 LIPT2A6NK58 231 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 TBX19O60806 448 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 DCAF10Q5QP82 559 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 Q8IYB0 196 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 OR2M7Q8NG81 312 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 AKR1E2Q96JD6 320 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 CXXC4Q9H2H0 198 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 CENPVL1A0A0U1RR11 272 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 CCL21O00585 134 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 CDIPTO14735 213 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 TOX3O15405 576 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-207ENST00000368226 LIMS3P0CW19 117 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 LIMS4P0CW20 117 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 RAC3P60763 192 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 TMEM128Q5BJH2 165 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 TSPO2Q5TGU0 170 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 DYRK2Q92630 601 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 HGDQ93099 445 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 PIGMQ9H3S5 423 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 MRM2Q9UI43 246 aaKnown RBP11.41□□□□□ -0.58
PTPRK-207ENST00000368226 SHANK3Q9BYB0 1731 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 SPINK4O60575 86 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 CTAG2O75638 210 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 CYC1P08574 325 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 PRSS42Q7Z5A4 293 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 C10orf111Q8N326 155 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 NUBPLQ8TB37 319 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 DHRS9Q9BPW9 319 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 ZNF629Q9UEG4 869 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-207ENST00000368226 IGKV3-7A0A075B6H7 116 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 MVDP53602 400 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 OR1A1Q9P1Q5 309 aa11.41□□□□□ -0.58
PTPRK-207ENST00000368226 EXOGQ9Y2C4 368 aaKnown RBP11.41□□□□□ -0.58
PTPRK-207ENST00000368226 TUBAL3A6NHL2 446 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 SCO1O75880 301 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 STPG1Q5TH74 334 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 FAM219AQ8IW50 185 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 PLEKHA2Q9HB19 425 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 KPTNQ9Y664 436 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 PLXNB2O15031 1838 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 ABCA3Q99758 1704 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 IL11P20809 199 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 TNXAQ16473 311 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
PTPRK-207ENST00000368226 NPTNQ9Y639 398 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms