RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MAS1LP35410 378 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 GNALP38405 381 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 HSF1Q00613 529 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 Q0VFX4 171 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 OR7A5Q15622 319 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ZNF239Q16600 458 aaKnown RBP10.08□□□□□ -0.8
USF1-201ENST00000368019 SWI5Q1ZZU3 235 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 SLC25A53Q5H9E4 307 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 THEM4Q5T1C6 240 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 Q6ZSR3 168 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 MARCH3Q86UD3 253 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 C9orf40Q8IXQ3 194 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ZNF561Q8N587 486 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 OR1N1Q8NGS0 311 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 RNF138Q8WVD3 245 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.08□□□□□ -0.8
USF1-201ENST00000368019 ZNF775Q96BV0 537 aaPredicted RBP10.08□□□□□ -0.8
USF1-201ENST00000368019 MALSU1Q96EH3 234 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ADAT3Q96EY9 351 aaPredicted RBP10.08□□□□□ -0.8
USF1-201ENST00000368019 ZNF251Q9BRH9 671 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 TM2D1Q9BX74 207 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 RTN4RQ9BZR6 473 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 OR8D2Q9GZM6 311 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 DECR2Q9NUI1 292 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 C1orf123Q9NWV4 160 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 METTL1Q9UBP6 276 aaKnown RBP10.08□□□□□ -0.8
USF1-201ENST00000368019 COPS7AQ9UBW8 275 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 MRPS28Q9Y2Q9 187 aaKnown RBP10.08□□□□□ -0.8
USF1-201ENST00000368019 TACC2O95359 2948 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 PKDREJQ9NTG1 2253 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 A0A1B0GW64 132 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 C5orf52A6NGY3 159 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 MSGN1A6NI15 193 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 SERPINE3A8MV23 424 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 PMP2P02689 132 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 S100A9P06702 114 aaKnown RBP10.07□□□□□ -0.8
USF1-201ENST00000368019 SFTA3P0C7M3 94 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 SEC11BP0C7V7 166 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 HKR1P10072 659 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 NR2C1P13056 603 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 EDN3P14138 238 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 RCC1P18754 421 aaPredicted RBP10.07□□□□□ -0.8
USF1-201ENST00000368019 CTSSP25774 331 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 MSX1P28360 303 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 LAP3P28838 519 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 RAB5CP51148 216 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 P2RY4P51582 365 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 ARHGDIBP52566 201 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 RAB1AP62820 205 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 SUPT4H1P63272 117 aaKnown RBP10.07□□□□□ -0.8
USF1-201ENST00000368019 C17orf67Q0P5P2 114 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 SMCO1Q147U7 214 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 DOK3Q7L591 496 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 OR5AS1Q8N127 324 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 ZNF321PQ8N8H1 164 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 UBAC2Q8NBM4 344 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 SLC25A43Q8WUT9 341 aaPredicted RBP10.07□□□□□ -0.8
USF1-201ENST00000368019 C11orf40Q8WZ69 217 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 DDIT4LQ96D03 193 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 C10orf35Q96D05 121 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 CMBLQ96DG6 245 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 KIRREL1Q96J84 757 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 GAL3ST1Q99999 423 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 KLHDC3Q9BQ90 382 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 RTBDNQ9BSG5 229 aaPredicted RBP10.07□□□□□ -0.8
USF1-201ENST00000368019 TMEM59Q9BXS4 323 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 TAF9BQ9HBM6 251 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 NXT1Q9UKK6 140 aaKnown RBP10.07□□□□□ -0.8
USF1-201ENST00000368019 C14orf166Q9Y224 244 aaKnown RBP10.07□□□□□ -0.8
USF1-201ENST00000368019 RPH3AQ9Y2J0 694 aaPredicted RBP10.07□□□□□ -0.8
USF1-201ENST00000368019 STARD10Q9Y365 291 aa10.07□□□□□ -0.8
USF1-201ENST00000368019 A0A0A6YYD4 124 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 LMX1BO60663 402 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 IGLV3-1P01715 115 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 AMY2BP19961 511 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 AGAP20933 346 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 OR1D4P47884 311 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 SRSF3P84103 164 aaKnown RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 RAB32Q13637 225 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 HABP2Q14520 560 aaPredicted RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 FAM76BQ5HYJ3 339 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 PLAC9Q5JTB6 97 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 ZNF324BQ6AW86 544 aaPredicted RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 RPUSD3Q6P087 351 aaKnown RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 GLIPR1L1Q6UWM5 242 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 ZNF101Q8IZC7 436 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 PNLDC1Q8NA58 520 aaKnown RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 PLPP5Q8NEB5 264 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 LFNGQ8NES3 379 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 OR8G5Q8NG78 346 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 OR13C9Q8NGT0 318 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 GAL3ST4Q96RP7 486 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 MESP1Q9BRJ9 268 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 MRPL13Q9BYD1 178 aaKnown RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 OR10A2Q9H208 303 aa10.06□□□□□ -0.8
USF1-201ENST00000368019 METTL8Q9H825 291 aaKnown RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 SEBOXQ9HB31 216 aaPredicted RBP10.06□□□□□ -0.8
USF1-201ENST00000368019 CENPMQ9NSP4 180 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms