RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 RAD51DO75771 328 aa16.71■□□□□ 0.27
CMTM3-201ENST00000361909 CD63P08962 238 aa16.71■□□□□ 0.27
CMTM3-201ENST00000361909 IL13RA2Q14627 380 aa16.71■□□□□ 0.27
CMTM3-201ENST00000361909 GGNBP1Q5YKI7 109 aa16.71■□□□□ 0.27
CMTM3-201ENST00000361909 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.71■□□□□ 0.27
CMTM3-201ENST00000361909 SULF2Q8IWU5 870 aa16.71■□□□□ 0.27
CMTM3-201ENST00000361909 HIST3H2BBQ8N257 126 aa16.71■□□□□ 0.27
CMTM3-201ENST00000361909 ERGIC1Q969X5 290 aa16.71■□□□□ 0.27
CMTM3-201ENST00000361909 K7N7A8 449 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 MASP2O00187 686 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 AHSA1O95433 338 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 LY86O95711 162 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 RSU1Q15404 277 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 UBE2V2Q15819 145 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 SSX2Q16385 188 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 CHRFAM7AQ494W8 412 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 TCEAL6Q6IPX3 200 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 MFSD8Q8NHS3 518 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 ARHGAP5-AS1Q96IT6 56 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 TGIF2Q9GZN2 237 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 OR10A2Q9H208 303 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 DECR2Q9NUI1 292 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 PUS1Q9Y606 427 aaKnown RBP eCLIP16.7■□□□□ 0.26
CMTM3-201ENST00000361909 LOC101059948A0A1B0GTJ6 334 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 LNP1A1A4G5 178 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 OR5H15A6NDH6 313 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 OR5H1A6NKK0 313 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 MKRN2OSH3BPM6 223 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 ONECUT2O95948 504 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 OR13C7P0DN81 318 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 CEACAM6P40199 344 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 ZFP36L1Q07352 338 aaKnown RBP16.7■□□□□ 0.26
CMTM3-201ENST00000361909 ZP4Q12836 540 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 ELOBQ15370 118 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 TMEM104Q8NE00 496 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 ASB10Q8WXI3 467 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 NELFAQ9H3P2 528 aa16.7■□□□□ 0.26
CMTM3-201ENST00000361909 SEC16AO15027 2179 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 IGLV3-12A0A075B6K2 115 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BKO60814 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 MPZL1O95297 269 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BJP06899 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 RNF224P0DH78 156 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BOP23527 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BBP33778 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BDP58876 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BCP62807 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 IL11RAQ14626 422 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST2H2BEQ16778 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-201ENST00000361909 SLC22A25Q6T423 547 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 TMEM156Q8N614 296 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HPSE2Q8WWQ2 592 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BHQ93079 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 NTNG2Q96CW9 530 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BNQ99877 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 HIST1H2BMQ99879 126 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 PARP12Q9H0J9 701 aaKnown RBP16.69■□□□□ 0.26
CMTM3-201ENST00000361909 CENPMQ9NSP4 180 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 PISDQ9UG56 409 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 R4GN57 208 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 FREM3P0C091 2139 aa16.69■□□□□ 0.26
CMTM3-201ENST00000361909 TMED7-TICAM2A0A0A6YYA0 188 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 ZNF724A8MTY0 619 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 H7C1Q1 480 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 RTN4RL2Q86UN3 420 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 LINC00346Q8IVM7 164 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 OR5AS1Q8N127 324 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 SLAMF6Q96DU3 332 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 SSX3Q99909 188 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 PIGQQ9BRB3 760 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 KIAA1456Q9P272 454 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 A0A087X0M5 115 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 A0A1B0GX30 115 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 B4DEV8 164 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 TERTO14746 1132 aaKnown RBP16.68■□□□□ 0.26
CMTM3-201ENST00000361909 SCRG1O75711 98 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 KNG1P01042 644 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 FGF5P12034 268 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 FOXO1Q12778 655 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 C1orf189Q5VU69 101 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 PLPP5Q8NEB5 264 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 STT3BQ8TCJ2 826 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 RHOVQ96L33 236 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 TP53TG5Q9Y2B4 290 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 KCNIP3Q9Y2W7 256 aa16.68■□□□□ 0.26
CMTM3-201ENST00000361909 RBFOX3A6NFN3 312 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 FOXI3A8MTJ6 420 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-201ENST00000361909 ALG1L2C9J202 215 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 NPIPA5E9PKD4 350 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 H3BQ15 152 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 TAGLN2P37802 199 aaKnown RBP16.67■□□□□ 0.26
CMTM3-201ENST00000361909 ALDH3B1P43353 468 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 SLC37A1P57057 533 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 DCAF7P61962 342 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 GRINAQ7Z429 371 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 LRTM2Q8N967 370 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 Q8WTZ3 238 aa16.67■□□□□ 0.26
CMTM3-201ENST00000361909 PTPMT1Q8WUK0 201 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-201ENST00000361909 RAB39BQ96DA2 213 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms