RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MIOXQ9UGB7 285 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ZNF749O43361 778 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 LYZL6O75951 148 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 NMUP48645 174 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 GABRA6Q16445 453 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 NKAIN1Q4KMZ8 207 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 MAMSTRQ6ZN01 415 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 MAVSQ7Z434 540 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 OR10G8Q8NGN5 311 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 DERL3Q96Q80 235 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 CDC42EP3Q9UKI2 254 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 C19orf53Q9UNZ5 99 aaPredicted RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 OR10G4Q8NGN3 311 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 OR10G9Q8NGN4 311 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 OR10G7Q8NGN6 311 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 YIPF6Q96EC8 236 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 HIST1H1EP10412 219 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 CEACAM6P40199 344 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 IL17BQ9UHF5 180 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 APCSP02743 223 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 FAM157BP0CG42 384 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 HLA-DRB5Q30154 266 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 MOB3BQ86TA1 216 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 BCORP1Q8N888 145 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 OR1B1Q8NGR6 318 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 TRMT61AQ96FX7 289 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 MRAP2Q96G30 205 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 PRRX1P54821 245 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 ERVS71-1P61550 626 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 PLSCR3Q9NRY6 295 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 HDGFL3Q9Y3E1 203 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 TMEM265A0A087WTH1 108 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 TMPRSS11DO60235 418 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 NPPBP16860 134 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 FUT3P21217 361 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 YBX1P67809 324 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 LPAL2Q16609 132 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 CLLU1OSQ5K130 101 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 EXOGQ9Y2C4 368 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 DOCK1Q14185 1865 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 A0A1W2PPC4 97 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 DIRC3C9JPN6 131 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 CDK2AP1O14519 115 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 FNDC7Q5VTL7 733 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 RGS7BPQ6MZT1 257 aaPredicted RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 SCD5Q86SK9 330 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 OR2I1PQ8NGU4 316 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 FAM131CQ96AQ9 280 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 SPSB1Q96BD6 273 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 CYSLTR2Q9NS75 346 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 DHCR7Q9UBM7 475 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 C3orf85A0A1B0GTC6 90 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 TIMP1P01033 207 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 ZNF260Q3ZCT1 412 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 TAS1R1Q7RTX1 841 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 NUP37Q8NFH4 326 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 ISG20L2Q9H9L3 353 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 ANKRD10Q9NXR5 420 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 NDUFB3O43676 98 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 GJB3O75712 270 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 CST9Q5W186 159 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 MRM1Q6IN84 353 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 FAHD2BQ6P2I3 314 aaPredicted RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 OR8A1Q8NGG7 326 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 FAHD2AQ96GK7 314 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 MPC2O95563 127 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 AWAT1Q58HT5 328 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 C20orf27Q9GZN8 174 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 TECRQ9NZ01 308 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 PRKRAO75569 313 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 C10orf126Q8N4M7 172 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 ZNF383Q8NA42 475 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 KTI12Q96EK9 354 aaPredicted RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 RSRP1Q9BUV0 290 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 CHD3Q12873 2000 aaKnown RBP8.35□□□□□ -1.07
VPS13A-203ENST00000360280 LPAR5Q9H1C0 372 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 SVILO95425 2214 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 A0A0U1RQS6 177 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 PRSS54Q6PEW0 395 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 LRRC3BQ96PB8 259 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 OR2D2Q9H210 308 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 FAM206AQ9NX38 181 aa8.35□□□□□ -1.07
VPS13A-203ENST00000360280 SMPD2O60906 423 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 GAMTQ14353 236 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 IZUMO4Q1ZYL8 232 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 Q6ZSR9 355 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 C20orf196Q8IYI0 205 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 C9orf170A2RU37 121 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 METRNLQ641Q3 311 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 CCDC190Q86UF4 302 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 ICOSLGO75144 302 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 DLK1P80370 383 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 STPG2Q8N412 459 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 FGF13Q92913 245 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 AKIRIN1Q9H9L7 192 aaPredicted RBP8.34□□□□□ -1.07
VPS13A-203ENST00000360280 PRSS50Q9UI38 385 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 LOC107984156A0A0G2JMH3 177 aa8.34□□□□□ -1.07
VPS13A-203ENST00000360280 CSN3P07498 182 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms