RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 RPEQ96AT9 228 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 FLYWCH2Q96CP2 140 aaKnown RBP14.32□□□□□ -0.12
COL18A1-203ENST00000359759 ASB16Q96NS5 453 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 FAM117AQ9C073 453 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 PNLIPRP2P54317 469 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 CCL7P80098 99 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 APOBEC3DQ96AK3 386 aaPredicted RBP14.32□□□□□ -0.12
COL18A1-203ENST00000359759 SLC45A2Q9UMX9 530 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 LIPGQ9Y5X9 500 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 CNRIP1Q96F85 164 aaPredicted RBP14.32□□□□□ -0.12
COL18A1-203ENST00000359759 METTL12A8MUP2 240 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 FAM157AC9JC47 383 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 MGPP08493 103 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 HIST1H1DP16402 221 aaKnown RBP14.32□□□□□ -0.12
COL18A1-203ENST00000359759 NOVP48745 357 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 GFRALQ6UXV0 394 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 ZNF383Q8NA42 475 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 OR4C3Q8NH37 302 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 CYSLTR2Q9NS75 346 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 ALG1L2C9J202 215 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 RGS13O14921 159 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 RER1O15258 196 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 FGF2P09038 288 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 C5orf17Q8NAS9 161 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 BCL2L10Q9HD36 194 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 SLC6A13Q9NSD5 602 aa14.32□□□□□ -0.12
COL18A1-203ENST00000359759 FIGNL2A6NMB9 653 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 HMGA1P17096 107 aaKnown RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 DSCR4P56555 118 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 LYRM7Q5U5X0 104 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 SLC26A10Q8NG04 563 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 OR6S1Q8NH40 331 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 A0A0A6YYD5 115 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 TCRBV16S1A1N1A0A5B0 115 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 M0R143 59 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 CBR3O75828 277 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 HPXP02790 462 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 CAPZBP47756 277 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 ARL6IP6Q8N6S5 226 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 MAP1LC3CQ9BXW4 147 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 PDFQ9HBH1 243 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 FBXL17Q9UF56 701 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 SLC6A1P30531 599 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 SELENOPP49908 381 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 DPTQ07507 201 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 WDR74Q6RFH5 385 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 OCIAD1Q9NX40 245 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 SIRT5Q9NXA8 310 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 AP4M1O00189 453 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 PPIHO43447 177 aaKnown RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 ACAA1P09110 424 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 OR8A1Q8NGG7 326 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 RGP1Q92546 391 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 NEURL2Q9BR09 285 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 IGKV3-7A0A075B6H7 116 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 OR5B21A6NL26 309 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 SEMA7AO75326 666 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 CRYBB2P43320 205 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 MRPL37Q9BZE1 423 aaKnown RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 TMED3Q9Y3Q3 217 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 EIF4E3Q8N5X7 224 aaKnown RBP14.31□□□□□ -0.12
COL18A1-203ENST00000359759 NTNG2Q96CW9 530 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 SNX22Q96L94 193 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 DOK1Q99704 481 aa14.31□□□□□ -0.12
COL18A1-203ENST00000359759 K7ESF4 209 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 MPC2O95563 127 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 ZNF25P17030 456 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-203ENST00000359759 SUCLG1P53597 346 aaKnown RBP14.3□□□□□ -0.12
COL18A1-203ENST00000359759 MICBQ29980 383 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 HLA-DRB5Q30154 266 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 ARRDC1Q8N5I2 433 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 MRGPRDQ8TDS7 321 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 CCL17Q92583 94 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 HLA-DRB3P79483 266 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 SMUG1Q53HV7 270 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 ZNF774Q6NX45 483 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 DPPA3Q6W0C5 159 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 FAM219AQ8IW50 185 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 HSF4Q9ULV5 492 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 HDGFL3Q9Y3E1 203 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 UBR2Q8IWV8 1755 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 C3orf80F5H4A9 247 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 CTAG2O75638 210 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 ANKRD34CP0C6C1 535 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 B3GNTL1Q67FW5 361 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-203ENST00000359759 MRM1Q6IN84 353 aaKnown RBP14.3□□□□□ -0.12
COL18A1-203ENST00000359759 ZNF880Q6PDB4 577 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 HSD17B13Q7Z5P4 300 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-203ENST00000359759 MUC15Q8N387 334 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 DTD1Q8TEA8 209 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 RBFOX3A6NFN3 312 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 HRASP01112 189 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 APELAP0DMC3 54 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 BMI1P35226 326 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 PTGFRP43088 359 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 AWAT1Q58HT5 328 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 C12orf73Q69YU5 71 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 NAA60Q9H7X0 242 aa14.3□□□□□ -0.12
COL18A1-203ENST00000359759 LPAR3Q9UBY5 353 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms