RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 FOXK1P85037 733 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 IL13RA2Q14627 380 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 PLPP5Q8NEB5 264 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 SLC26A10Q8NG04 563 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 CRLF2Q9HC73 371 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBAP1-202ENST00000359544 CENPMQ9NSP4 180 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 FAM206AQ9NX38 181 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 TGFBR3LH3BV60 316 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 CLDN4O14493 209 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 PHOX2AO14813 284 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 IGLV3-21P80748 117 aaPredicted RBP13.11□□□□□ -0.31
UBAP1-202ENST00000359544 FUT7Q11130 342 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 LINC00346Q8IVM7 164 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 RNASEH2CQ8TDP1 164 aaKnown RBP13.11□□□□□ -0.31
UBAP1-202ENST00000359544 FRZBQ92765 325 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 RCC1LQ96I51 464 aaKnown RBP13.11□□□□□ -0.31
UBAP1-202ENST00000359544 FAM210BQ96KR6 192 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 A0A087WZY1 265 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 BLACEA4D250 179 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 DXOO77932 396 aaKnown RBP13.1□□□□□ -0.31
UBAP1-202ENST00000359544 UTS2O95399 124 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 IL33O95760 270 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 HSPB1P04792 205 aaKnown RBP13.1□□□□□ -0.31
UBAP1-202ENST00000359544 POMZP3Q6PJE2 187 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 RNF133Q8WVZ7 376 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 PBOV1Q9GZY1 135 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 METTL9Q9H1A3 318 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 OR10A2Q9H208 303 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 BANF2Q9H503 90 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 KNL1Q8NG31 2342 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 TRBV23OR9-2A0A075B6M9 112 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 NSG1A0A0A6YYJ2 146 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 H0YL77 283 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 CRTAPO75718 401 aaPredicted RBP13.1□□□□□ -0.31
UBAP1-202ENST00000359544 SEMA4FO95754 770 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 ADH1BP00325 375 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 OR5H8P0DN80 308 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 COX5BP10606 129 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 PVRP15151 417 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 MPLP40238 635 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 CEBPGP53567 150 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 RND3P61587 244 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 STT3BQ8TCJ2 826 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 ABHD5Q8WTS1 349 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 DNAJA3Q96EY1 480 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 C1orf147Q96MC9 270 aaPredicted RBP13.1□□□□□ -0.31
UBAP1-202ENST00000359544 PRTFDC1Q9NRG1 225 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 STARD5Q9NSY2 213 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 SPTBN4Q9H254 2564 aa13.1□□□□□ -0.31
UBAP1-202ENST00000359544 A6NIZ1 184 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 QDPRP09417 244 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 RAP1BP61224 184 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 HNF4GQ14541 408 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 LYSMD4Q5XG99 296 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 ACTR3CQ9C0K3 210 aaPredicted RBP13.09□□□□□ -0.31
UBAP1-202ENST00000359544 CDRT15L2A8MXV6 281 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 KLK2P20151 261 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 H3F3AP84243 136 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 ACY1Q03154 408 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 ZNF266Q14584 549 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 ARL6IP1Q15041 203 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 RTL6Q6ICC9 239 aa13.09□□□□□ -0.31
UBAP1-202ENST00000359544 CEP250Q9BV73 2442 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 A0A0J9YY10 115 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 MED19A0JLT2 244 aaPredicted RBP13.08□□□□□ -0.32
UBAP1-202ENST00000359544 ZNF878C9JN71 531 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 CFIP05156 583 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 GIMD1P0DJR0 217 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 OR3A4PP47883 348 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 ERV3-1Q14264 604 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 TMEM183AQ8IXX5 376 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 DDA1Q9BW61 102 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 FOXD3Q9UJU5 478 aaPredicted RBP13.08□□□□□ -0.32
UBAP1-202ENST00000359544 DKKL1Q9UK85 242 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 WSB1Q9Y6I7 421 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 FAM230AA0A1W2PPH8 454 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 RRP8O43159 456 aaKnown RBP13.08□□□□□ -0.32
UBAP1-202ENST00000359544 SCAF4O95104 1147 aaKnown RBP13.08□□□□□ -0.32
UBAP1-202ENST00000359544 IGHV4-34P06331 123 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 HCKP08631 526 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 SNRPCP09234 159 aaKnown RBP13.08□□□□□ -0.32
UBAP1-202ENST00000359544 TNFRSF9Q07011 255 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 PPA1Q15181 289 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 HAGHQ16775 308 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 ZNF506Q5JVG8 444 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 SPSB3Q6PJ21 355 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 OR51T1Q8NGJ9 327 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 OR2G3Q8NGZ4 309 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 SPACA5Q96QH8 159 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
UBAP1-202ENST00000359544 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 PADI1Q9ULC6 663 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 CBY1Q9Y3M2 126 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 DOCK9Q9BZ29 2069 aa13.08□□□□□ -0.32
UBAP1-202ENST00000359544 CCDC187A0A096LP49 1063 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 A0A1W2PQU0 124 aa13.07□□□□□ -0.32
UBAP1-202ENST00000359544 SERPINE3A8MV23 424 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms