RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 TAS2R20P59543 309 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 LSM6P62312 80 aaKnown RBP4.43□□□□□ -1.7
ATXN3-202ENST00000359366 MRPS34P82930 218 aaKnown RBP4.43□□□□□ -1.7
ATXN3-202ENST00000359366 KCNMB1Q16558 191 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 FAM27BQ5VT28 67 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 TMEM244Q5VVB8 128 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF627Q7L945 461 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 SLC16A13Q7RTY0 426 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF100Q8IYN0 542 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 TMEM178AQ8NBL3 297 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 CPEB3Q8NE35 698 aaKnown RBP4.43□□□□□ -1.7
ATXN3-202ENST00000359366 OR10K1Q8NGX5 313 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 HAVCR2Q8TDQ0 301 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 PHYHIPQ92561 330 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 DVL3Q92997 716 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-202ENST00000359366 PIGTQ969N2 578 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 SLC25A28Q96A46 364 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 RRNAD1Q96FB5 475 aaKnown RBP4.43□□□□□ -1.7
ATXN3-202ENST00000359366 C1QTNF6Q9BXI9 259 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 REG4Q9BYZ8 158 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 NKX6-2Q9C056 277 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-202ENST00000359366 ACTR6Q9GZN1 396 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 BANF2Q9H503 90 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 PLEKHA1Q9HB21 404 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 RCE1Q9Y256 329 aa4.43□□□□□ -1.7
ATXN3-202ENST00000359366 MRPS18CQ9Y3D5 142 aaKnown RBP4.43□□□□□ -1.7
ATXN3-202ENST00000359366 PLCE1Q9P212 2302 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 IGKV1-9A0A0C4DH69 117 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 C5orf52A6NGY3 159 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 SLC22A20A6NK97 555 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 HSPB2A8KAH6 182 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF587BE7ETH6 402 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 TSTD3H0UI37 97 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ACOT7O00154 380 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 DNPH1O43598 174 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 SYNGR3O43761 229 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 CTAG2O75638 210 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 UBL3O95164 117 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 NR2C1P13056 603 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 APOBEC3AP31941 199 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 RBMXP38159 391 aaKnown RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 VAMP2P63027 116 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 NHLH1Q02575 133 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 EXOSC2Q13868 293 aaKnown RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 HSPB2Q16082 182 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 OXLD1Q5BKU9 147 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ATPAF1Q5TC12 328 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 P4HA3Q7Z4N8 544 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 C1QL2Q7Z5L3 287 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 TOMM5Q8N4H5 51 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 CNEP1R1Q8N9A8 125 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 TMEM104Q8NE00 496 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 OR8S1Q8NH09 359 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 OR1F12Q8NHA8 337 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 STOML3Q8TAV4 291 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 CPT1CQ8TCG5 803 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF431Q8TF32 576 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 APH1AQ96BI3 265 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 S100A16Q96FQ6 103 aaKnown RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZC3HAV1LQ96H79 300 aaKnown RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 TRIB1Q96RU8 372 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 OR2H1Q9GZK4 316 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 CRIM1Q9NZV1 1036 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 UPB1Q9UBR1 384 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 FLVCR2Q9UPI3 526 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 PIGLQ9Y2B2 252 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 GOLT1BQ9Y3E0 138 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 LOC100509620A0A075B734 347 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 LOC100289279A0A1B0GTE1 492 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 WIPF3A6NGB9 483 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF891A8MT65 544 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 SCAF4O95104 1147 aaKnown RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 HEXAP06865 529 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 MUC1P15941 1255 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ANXA7P20073 488 aaKnown RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 BDKRB2P30411 391 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 CDKN1BP46527 198 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF133P52736 654 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 CEBPGP53567 150 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 RRAS2P62070 204 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 GRB2P62993 217 aaKnown RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 HTD2P86397 168 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 FOXF2Q12947 444 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 UNC119Q13432 240 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 HLXQ14774 488 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 RTP5Q14D33 572 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 UBE2V2Q15819 145 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 SLC22A6Q4U2R8 563 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 HACD4Q5VWC8 232 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 OLFML2AQ68BL7 652 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 GLT8D1Q68CQ7 371 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 FAM166AQ6J272 317 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 PLET1Q6UQ28 207 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 FOXL2NBQ6ZUU3 175 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 MYPOPQ86VE0 399 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ANGPTL5Q86XS5 388 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 OR5AS1Q8N127 324 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 RPRMLQ8N4K4 120 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 BVESQ8NE79 360 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 BEST4Q8NFU0 473 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms