RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 C9orf50Q5SZB4 431 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 DEFB124Q8NES8 71 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 PRSS3P2Q8NHM4 247 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 PLA2G2FQ9BZM2 168 aa16.39■□□□□ 0.21
SHANK1-202ENST00000359082 TRAV20A0A0B4J274 112 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 IGHA1P01876 353 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 IGHA2P01877 340 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 TP53I13Q8NBR0 393 aaPredicted RBP16.38■□□□□ 0.21
SHANK1-202ENST00000359082 MYO18AQ92614 2054 aaKnown RBP16.38■□□□□ 0.21
SHANK1-202ENST00000359082 ORM2P19652 201 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 ZP3P21754 424 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 PTGFRP43088 359 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 PABPC1L2AQ5JQF8 200 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 ZBTB37Q5TC79 503 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 ZDHHC22Q8N966 263 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 MRGPRDQ8TDS7 321 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 TJP1Q07157 1748 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 MDH2P40926 338 aaKnown RBP16.38■□□□□ 0.21
SHANK1-202ENST00000359082 ST3GAL2Q16842 350 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 DHRS13Q6UX07 377 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 FAM24AA6NFZ4 105 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 DHRS11Q6UWP2 260 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 PRDM7Q9NQW5 492 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 TRAV34A0A0B4J273 112 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 A0A1B0GTQ1 180 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 CD96P40200 585 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 ARRDC1Q8N5I2 433 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 ABHD14AQ9BUJ0 271 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.38■□□□□ 0.21
SHANK1-202ENST00000359082 ZMIZ1Q9ULJ6 1067 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 UFC1Q9Y3C8 167 aa16.38■□□□□ 0.21
SHANK1-202ENST00000359082 SLX4Q8IY92 1834 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 C9orf170A2RU37 121 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 ANKRD34CP0C6C1 535 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 PPP1R1AQ13522 171 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 A0A1B0GTH9 108 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 J3KRW8 73 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 DNAJB12Q9NXW2 375 aaKnown RBP16.37■□□□□ 0.21
SHANK1-202ENST00000359082 OR5V1Q9UGF6 321 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 AMMECR1Q9Y4X0 333 aaPredicted RBP16.37■□□□□ 0.21
SHANK1-202ENST00000359082 CST4P01036 141 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 ZNF32P17041 273 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 RAB7AP51149 207 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 PRRX1P54821 245 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 CACNG5Q9UF02 275 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 FAM157AC9JC47 383 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 TNXAQ16473 311 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 OR10D4PQ8NGN7 298 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 SLC45A2Q9UMX9 530 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 IGHV5-51A0A0C4DH38 117 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 TMEM241Q24JQ0 296 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 TGIF2LYQ8IUE0 185 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 ANGPTL6Q8NI99 470 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 RNF2Q99496 336 aa16.37■□□□□ 0.21
SHANK1-202ENST00000359082 TRAV17A0A0B4J275 112 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 CHRNA7P36544 502 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 SLC25A1P53007 311 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 CEBPEQ15744 281 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 OR2M3Q8NG83 312 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 OR10D3Q8NH80 312 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 SIGLEC7Q9Y286 467 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 LINC01387J3KSC0 135 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 K7EQS6 105 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 FCN1O00602 326 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 ZNF793Q6ZN11 406 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 MAP1LC3B2A6NCE7 125 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 NDUFB6O95139 128 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 UQCC3Q6UW78 93 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 SFTPA2Q8IWL1 248 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 SFTPA1Q8IWL2 248 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 AMER3Q8N944 861 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 NEIL1Q96FI4 390 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-202ENST00000359082 GRAMD2BQ96HH9 432 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 MAP1LC3BQ9GZQ8 125 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 TMED3Q9Y3Q3 217 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 OR5AC1P0C628 307 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 PRSS12P56730 875 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 PRSS41Q7RTY9 318 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 KCNK15Q9H427 330 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 SIRT3Q9NTG7 399 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-202ENST00000359082 IL36GQ9NZH8 169 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 MPZL1O95297 269 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 GALNSP34059 522 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 PRICKLE4Q2TBC4 344 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 SEBOXQ9HB31 216 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-202ENST00000359082 FKBP11Q9NYL4 201 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 RASL12Q9NYN1 266 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 NUMA1Q14980 2115 aa16.36■□□□□ 0.21
SHANK1-202ENST00000359082 PATE4P0C8F1 98 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 RAB32Q13637 225 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 MUC20Q8N307 709 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-202ENST00000359082 NTNG2Q96CW9 530 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 COA4Q9NYJ1 87 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 KLF3P57682 345 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-202ENST00000359082 ERVS71-1P61550 626 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 PRSS42Q7Z5A4 293 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 SIRT5Q9NXA8 310 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 MT-CO3P00414 261 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 IQCJQ1A5X6 159 aa16.35■□□□□ 0.21
SHANK1-202ENST00000359082 CCDC190Q86UF4 302 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms