RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PHYHD1Q5SRE7 291 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 GALMQ96C23 342 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 ESRP2Q9H6T0 727 aaKnown RBP12.17□□□□□ -0.46
VCP-201ENST00000358901 NAA60Q9H7X0 242 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 TMEM218A2RU14 115 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 SLC22A20A6NK97 555 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 PGA3P0DJD8 388 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 NXPH1P58417 271 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 RHBDD2Q6NTF9 364 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 CLEC9AQ6UXN8 241 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 ZADH2Q8N4Q0 377 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 CISD2Q8N5K1 135 aaKnown RBP12.17□□□□□ -0.46
VCP-201ENST00000358901 P4HTMQ9NXG6 502 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 PLA2G3Q9NZ20 509 aa12.17□□□□□ -0.46
VCP-201ENST00000358901 UBE2L5PA0A1B0GUS4 154 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 ZNF205O95201 554 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 OR11G2Q8NGC1 345 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 OR6X1Q8NH79 312 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 PTPMT1Q8WUK0 201 aaPredicted RBP12.16□□□□□ -0.46
VCP-201ENST00000358901 ASB10Q8WXI3 467 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 SLC35E1Q96K37 410 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 PCED1AQ9H1Q7 454 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 OR2M5A3KFT3 312 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 H0Y8G0 127 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 FOXS1O43638 330 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 ANKRD34CP0C6C1 535 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 KCNJ3P48549 501 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 TFF2Q03403 129 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 FAHD2BQ6P2I3 314 aaPredicted RBP12.16□□□□□ -0.46
VCP-201ENST00000358901 FAM219AQ8IW50 185 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 EDARADDQ8WWZ3 215 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 SARAFQ96BY9 339 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 FAHD2AQ96GK7 314 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 IP6K3Q96PC2 410 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 TECTBQ96PL2 329 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 HIF1ANQ9NWT6 349 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
VCP-201ENST00000358901 CCDC187A0A096LP49 1063 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 ZNF891A8MT65 544 aaPredicted RBP12.16□□□□□ -0.46
VCP-201ENST00000358901 SLC25A6P12236 298 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 NTF3P20783 257 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 ZBTB25P24278 435 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 RAC1P63000 192 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 NUBPLQ8TB37 319 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 SLC35B3Q9H1N7 401 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 LIPT2A6NK58 231 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 IGKV1D-16P01601 117 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 HLA-DQB1P01920 261 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 VSIG8P0DPA2 414 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 DGAT2L6Q6ZPD8 337 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 CXorf67Q86X51 503 aaPredicted RBP12.16□□□□□ -0.46
VCP-201ENST00000358901 CBLN2Q8IUK8 224 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 CLDN23Q96B33 292 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 S1PR3Q99500 378 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 TOLLIPQ9H0E2 274 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 ANXA10Q9UJ72 324 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 KLHDC2Q9Y2U9 406 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 CACNA1DQ01668 2161 aa12.16□□□□□ -0.46
VCP-201ENST00000358901 TGOLN2O43493 480 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 IL2RAP01589 272 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 CCL2P13500 99 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 GALNSP34059 522 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 MGAT2Q10469 447 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 PRDX4Q13162 271 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 ACER2Q5QJU3 275 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 FAM58AQ8N1B3 248 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 OR4D10Q8NGI6 311 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 OR10D3Q8NH80 312 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 OIT3Q8WWZ8 545 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 NTNG2Q96CW9 530 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 RASL10BQ96S79 203 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 ZNF355PQ9NSJ1 428 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 ZNF391Q9UJN7 358 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 LY75O60449 1722 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 ZNF320A2RRD8 509 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 G3V3Q6 166 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 TNFSF15O95150 251 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 DEFA4P12838 97 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 FGF7P21781 194 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 POLR2GP62487 172 aaKnown RBP eCLIP12.15□□□□□ -0.46
VCP-201ENST00000358901 TLE1Q04724 770 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 BTNL8Q6UX41 500 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
VCP-201ENST00000358901 EDEM2Q9BV94 578 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 ELF5Q9UKW6 265 aaPredicted RBP12.15□□□□□ -0.46
VCP-201ENST00000358901 C3orf85A0A1B0GTC6 90 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 A0A1W2PQD3 144 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 AQP7P3A6NL99 342 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 OR5G3P0C626 314 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 SPINK2P20155 84 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 MMP16P51512 607 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 TUSC1Q2TAM9 212 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 CD200R1LQ6Q8B3 271 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 SLC25A42Q86VD7 318 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 OR2I1PQ8NGU4 316 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms