RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TMEM202A6NGA9 273 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 K7EQM0 130 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 DDNO94850 711 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 RAE1P78406 368 aaKnown RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 KLF16Q9BXK1 252 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 SLC25A22Q9H936 323 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 MANBALQ9NQG1 85 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 C11orf94C9JXX5 98 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 TGFBR3Q03167 851 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 MS4A4AQ96JQ5 239 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 VN1R1Q9GZP7 353 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PISDQ9UG56 409 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PCOLCE2Q9UKZ9 415 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 COL2A1P02458 1487 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 A0A1W2PR48 441 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 IER3P46695 156 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 HINT1P49773 126 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 P2RY4P51582 365 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 BPIFA4PQ86YQ2 179 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 RBMXL3Q8N7X1 1067 aaKnown RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OR1L6Q8NGR2 347 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 MRPL24Q96A35 216 aaKnown RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF707Q96C28 371 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 NRASP01111 189 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 KRASP01116 189 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SLC38A11Q08AI6 406 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CLN3Q13286 438 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 PCGF1Q9BSM1 259 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF346Q9UL40 294 aaKnown RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 M0R2Z0 102 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 PGA3P0DJD8 388 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CSNK1G2P78368 415 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 DNLZQ5SXM8 178 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SLAMF6Q96DU3 332 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 TCTN2Q96GX1 697 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 KLF15Q9UIH9 416 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 TMEM265A0A087WTH1 108 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 TOX3O15405 576 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 NDUFA2O43678 99 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CBR3O75828 277 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 RPS27P42677 84 aaKnown RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 FAM3BP58499 235 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 TAS2R45P59539 299 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 TRMT12Q53H54 448 aaKnown RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SLC25A38Q96DW6 304 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 ACY3Q96HD9 319 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SGIP1Q9BQI5 828 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 DOCK1Q14185 1865 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 ADAMTS4O75173 837 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SEC11BP0C7V7 166 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 EFNB1P98172 346 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CXCL16Q9H2A7 254 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 ADAMTS5Q9UNA0 930 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 KCNE3Q9Y6H6 103 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 HAND1O96004 215 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 ERV3-1Q14264 604 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 Q56UQ5 140 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 OR10J5Q8NHC4 309 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 PELI1Q96FA3 418 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 HEYLQ9NQ87 328 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SIGLEC7Q9Y286 467 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 TLCD2A6NGC4 264 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 PITX3O75364 302 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 RHBDL1O75783 438 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 HSPB1P04792 205 aaKnown RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CHRNB4P30926 498 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SRP14P37108 136 aaKnown RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CTAG1AP78358 180 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 GPM6BQ13491 265 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 BSXQ3C1V8 233 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 DHRS11Q6UWP2 260 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 FAM219AQ8IW50 185 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 ITGB4P16144 1822 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SOD2P04179 222 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 MPV17LQ2QL34 196 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SP6Q3SY56 376 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SPRYD7Q5W111 196 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 MED25Q71SY5 747 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 FBXL14Q8N1E6 418 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 ASB16Q96NS5 453 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 FAM234AQ9H0X4 552 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 RREB1Q92766 1687 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 NWD2Q9ULI1 1742 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 FKBP1BP68106 108 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CLLU1OSQ5K130 101 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 HSPB6O14558 160 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 PRAMEF4O60810 478 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 DEDDO75618 318 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 BRS3P32247 399 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CLDN17P56750 224 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 BTNL3Q6UXE8 466 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 TMEFF1Q8IYR6 380 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SIRT4Q9Y6E7 314 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-203ENST00000358544 FAM221AA4D161 298 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 CD79AP11912 226 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 LBX1P52954 281 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 ADAMTSL4Q6UY14 1074 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 SDF2Q99470 211 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 HS3ST2Q9Y278 367 aa5.44□□□□□ -1.54
VPS13B-203ENST00000358544 GAGE10A6NGK3 116 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms